RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 C4orf50Q6ZRC1 276 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 CEP68Q76N32 757 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 CACNA2D4Q7Z3S7 1137 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 TMC8Q8IU68 726 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 CPA6Q8N4T0 437 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 FEZF2Q8TBJ5 459 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 POMGNT1Q8WZA1 660 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 TCEAL4Q96EI5 215 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 TMX3Q96JJ7 454 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 ZBTB45Q96K62 511 aaPredicted RBP6.69□□□□□ -1.34
NPM1-205ENST00000518587 TMEM209Q96SK2 561 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 PYM1Q9BRP8 204 aaKnown RBP6.69□□□□□ -1.34
NPM1-205ENST00000518587 SLC12A9Q9BXP2 914 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 DNAI2Q9GZS0 605 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 ZNF700Q9H0M5 742 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 SP110Q9HB58 689 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 DPP3Q9NY33 737 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 APEX2Q9UBZ4 518 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 NDRG2Q9UN36 371 aaKnown RBP6.69□□□□□ -1.34
NPM1-205ENST00000518587 SLC8A2Q9UPR5 921 aa6.69□□□□□ -1.34
NPM1-205ENST00000518587 MTF2Q9Y483 593 aaPredicted RBP6.69□□□□□ -1.34
NPM1-205ENST00000518587 CFAP54Q96N23 3096 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 COL4A2P08572 1712 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 PP2D1A8MPX8 630 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 TRDMT1O14717 391 aaKnown RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 SLC9A3R1O14745 358 aaPredicted RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 RHOBTB1O94844 696 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 GJB6O95452 261 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 HPXP02790 462 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 HAPLN1P10915 354 aaPredicted RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 JUNBP17275 347 aaPredicted RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 CCR2P41597 374 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 MAGEA11P43364 429 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 AFMP43652 599 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 EPHB1P54762 984 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 RBP5P82980 135 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 BYSLQ13895 437 aaKnown RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 E2F5Q15329 346 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ELF2Q15723 593 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 SLC39A12Q504Y0 691 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 RRAGBQ5VZM2 374 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 LMBRD2Q68DH5 695 aaPredicted RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 IL31Q6EBC2 164 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 VSTM1Q6UX27 236 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 PRR23BQ6ZRT6 265 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ZNF720Q7Z2F6 126 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 KCNK18Q7Z418 384 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 MON1AQ86VX9 555 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 DDX42Q86XP3 938 aaKnown RBP eCLIP6.68□□□□□ -1.341e-6■■■□□ 17.3
NPM1-205ENST00000518587 BRSK2Q8IWQ3 736 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 CCDC65Q8IXS2 484 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 SYCP3Q8IZU3 236 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 CMTM8Q8IZV2 173 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 PDZD8Q8NEN9 1154 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ATP2A3Q93084 1043 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 ANKRD36BP1Q96IX9 119 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 PGLYRP2Q96PD5 576 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 SEPT5Q99719 369 aaPredicted RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 PLA2G2FQ9BZM2 168 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 CXCL16Q9H2A7 254 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ZHX3Q9H4I2 956 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ZSCAN16Q9H4T2 348 aaPredicted RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 MRPL44Q9H9J2 332 aaKnown RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 MAGEF1Q9HAY2 307 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 ST7Q9NRC1 585 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 TDP1Q9NUW8 608 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 GDAP2Q9NXN4 497 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 TBC1D7Q9P0N9 293 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 CGNQ9P2M7 1197 aaKnown RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 SF3B6Q9Y3B4 125 aaKnown RBP6.68□□□□□ -1.34
NPM1-205ENST00000518587 UBE4BO95155 1302 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 TICRRQ7Z2Z1 1910 aa6.68□□□□□ -1.34
NPM1-205ENST00000518587 TRAV19A0A0A6YYK7 116 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 SLC38A8A6NNN8 435 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 NOL4O94818 638 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 NFATC1O95644 943 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 ADRB1P08588 477 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 TMEM191BP0C7N4 346 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 CD72P21854 359 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 ANXA13P27216 316 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 CALRP27797 417 aaKnown RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 TRHRP34981 398 aaPredicted RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 EIF2DP41214 584 aaKnown RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 VIPR2P41587 438 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 ZNF143P52747 638 aaPredicted RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 ATXN1P54253 815 aaKnown RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 RUNX3Q13761 415 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 HLTFQ14527 1009 aaKnown RBP eCLIP6.67□□□□□ -1.34
NPM1-205ENST00000518587 IL17AQ16552 155 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 DDR2Q16832 855 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 L1TD1Q5T7N2 865 aaKnown RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 PPP4R4Q6NUP7 873 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 GAREM2Q75VX8 874 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 ATAD1Q8NBU5 361 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 GAB3Q8WWW8 586 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 INTS4Q96HW7 963 aaKnown RBP6.67□□□□□ -1.34
NPM1-205ENST00000518587 SPATA17Q96L03 361 aa6.67□□□□□ -1.34
NPM1-205ENST00000518587 ZSWIM3Q96MP5 696 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms