RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 BARX2Q9UMQ3 279 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 TNFRSF21O75509 655 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 PHKG1Q16816 387 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 KYQ8NBH2 561 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC20A1Q8WUM9 679 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 IL1RL2Q9HB29 575 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 H2AFYO75367 372 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CBX6O95503 412 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 TFE3P19532 575 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CTNNB1P35222 781 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 PTPN11Q06124 597 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 NR1D2Q14995 579 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 NEDD8Q15843 81 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 MRNIPQ6NTE8 343 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 VGLL2Q8N8G2 317 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ASZ1Q8WWH4 475 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CIPCQ9C0C6 399 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 ATXN3LQ9H3M9 355 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC28A3Q9HAS3 691 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 CACNA2D2Q9NY47 1150 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 USE1Q9NZ43 259 aa12.54□□□□□ -0.4
PCDHGA6-201ENST00000517434 A0A087X0T9 212 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 HEATR9A2RTY3 570 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 OPLAHO14841 1288 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CNOT3O75175 753 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SMNDC1O75940 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 POLBP06746 335 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM228BP0C875 321 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 GZMAP12544 262 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 FASP25445 335 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCR1P32246 355 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 KCNJ2P63252 427 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 PURAQ00577 322 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SMAD1Q15797 465 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CENPPQ6IPU0 288 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM45BPQ6NSW5 357 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 BNIPLQ7Z465 357 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SVOPQ8N4V2 548 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 LZTR1Q8N653 840 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 NAT9Q9BTE0 207 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ZCCHC2Q9C0B9 1178 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 TMEM117Q9H0C3 514 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SEMA4AQ9H3S1 761 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 PRDM16Q9HAZ2 1276 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 GPRC5CQ9NQ84 441 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 WFS1O76024 890 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ALOX12P18054 663 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 PSMB9P28065 219 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SMARCB1Q12824 385 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 DGKZQ13574 1117 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 BLMHQ13867 455 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 RBBP7Q16576 425 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 TTMPQ5BVD1 217 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 MROH9Q5TGP6 573 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 C1orf131Q8NDD1 294 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC30A5Q8TAD4 765 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ADGRE3Q9BY15 652 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 LRMDAQ9H2I8 198 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 INTS13Q9NVM9 706 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 DNAJC16Q9Y2G8 782 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 V9GYQ6 96 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 COL1A2P08123 1366 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLIT3O75094 1523 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 POMCP01189 267 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 PLEKP08567 350 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SERPINB5P36952 375 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 KLK7P49862 253 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ERAP2Q6P179 960 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM43BQ6ZT52 329 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 BRSK2Q8IWQ3 736 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 TSEN2Q8NCE0 465 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 RORBQ92753 470 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CPB2Q96IY4 423 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 FAM95CA0A1B0GW59 222 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLCO1B7G3V0H7 640 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 MATN2O00339 956 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ALOX5P09917 674 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ITGALP20701 1170 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 RPL9P32969 192 aaKnown RBP12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 TAB1Q15750 504 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CCDC153Q494R4 210 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 CBWD2Q8IUF1 395 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms