RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CCDC7Q96M83 1385 aa6.53□□□□□ -1.36
TRAPPC11-209ENST00000512476 OR6C74A6NCV1 312 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 GOLGA8CPA6NN73 597 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 KRIT1O00522 736 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 PCDH17O14917 1159 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZW10O43264 779 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SPAG6O75602 509 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ABCB1P08183 1280 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SPARCP09486 303 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TXNP10599 105 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 NR2F2P24468 414 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 CLCNKBP51801 687 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 EIF3EP60228 445 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TUBB4BP68371 445 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 MALLQ13021 153 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TUBB2AQ13885 445 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SPIDRQ14159 915 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 NOMO1Q15155 1222 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 PPM1JQ5JR12 505 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 NOL9Q5SY16 702 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 AAGABQ6PD74 315 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 MFSD7Q6UXD7 560 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKS1BQ7Z6G8 1248 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 RHOT2Q8IXI1 618 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 HIPK4Q8NE63 616 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TNPO1Q92973 898 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 IFT74Q96LB3 600 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 MTMR9Q96QG7 549 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TUBB2BQ9BVA1 445 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 JAM3Q9BX67 310 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 GPR61Q9BZJ8 451 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TRPV6Q9H1D0 765 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 DCTPP1Q9H773 170 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZDHHC3Q9NYG2 299 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 BAIAP2L1Q9UHR4 511 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 LIPT1Q9Y234 373 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 PCDHA2Q9Y5H9 948 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMEM131LA2VDJ0 1609 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ADGRF5Q8IZF2 1346 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 DDAH2O95865 285 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 CST3P01034 146 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 CNPP09543 421 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ITGA4P13612 1032 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SYN1P17600 705 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 EN2P19622 333 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 HOXC8P31273 242 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 YBX1P67809 324 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 HNRNPDQ14103 355 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 DHX34Q14147 1143 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 CCDC142Q17RM4 750 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ERCC6LQ2NKX8 1250 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 LRIT3Q3SXY7 679 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SGO1Q5FBB7 561 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 CYP20A1Q6UW02 462 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 HTR3DQ70Z44 454 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 VGLL2Q8N8G2 317 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 OR6Y1Q8NGX8 325 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 CCDC110Q8TBZ0 833 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SAMD11Q96NU1 681 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 NFKBIZQ9BYH8 718 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 OSBPL6Q9BZF3 934 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SMARCAD1Q9H4L7 1026 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 IARS2Q9NSE4 1012 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SIRT3Q9NTG7 399 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 GDAP2Q9NXN4 497 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMOD3Q9NYL9 352 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 NCDNQ9UBB6 729 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 PCDHA10Q9Y5I2 948 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 NEXMIFQ5QGS0 1516 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 KIF7Q2M1P5 1343 aa6.52□□□□□ -1.37
TRAPPC11-209ENST00000512476 IQGAP1P46940 1657 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ST20-MTHFSA0A0A6YYL1 179 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ACOD1A6NK06 481 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMEM232C9JQI7 657 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 IFNL4K9M1U5 179 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 EBAG9O00559 213 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 DNALI1O14645 258 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PPP6R2O75170 966 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 VNN2O95498 520 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 YEATS4O95619 227 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 S1PR4O95977 384 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 BCRP11274 1271 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 GLRA2P23416 452 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 MCM3P25205 808 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 CDC25CP30307 473 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ABCG1P45844 678 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC5A3P53794 718 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 GSTO1P78417 241 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PPP3CAQ08209 521 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NR0B2Q15466 257 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 KHDC1LQ5JSQ8 128 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC15A4Q8N697 577 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZNF565Q8N9K5 539 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 POC5Q8NA72 575 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 WASF1Q92558 559 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms