RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 FAM124AQ86V42 546 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 MFN1Q8IWA4 741 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 ZNF366Q8N895 744 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 HJURPQ8NCD3 748 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 WFDC5Q8TCV5 224 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 FAM149B1Q96BN6 582 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 PRICKLE1Q96MT3 831 aaPredicted RBP15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 KREMEN1Q96MU8 473 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 SERPINB11Q96P15 392 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 TRIM62Q9BVG3 475 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 ZMIZ1Q9ULJ6 1067 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 CNTN6Q9UQ52 1028 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 SPEGQ15772 3267 aa15.28■□□□□ 0.04
CCHCR1-229ENST00000512418 IGF2RP11717 2491 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 BIN1O00499 593 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 SH3BP5O60239 455 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 CER1O95813 267 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 FYNP06241 537 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 POLR2EP19388 210 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 CD70P32970 193 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 GPD2P43304 727 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 ACADSBP45954 432 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 RPL34P49207 117 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 FAM193AP78312 1265 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 MEA1Q16626 185 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 ZNF423Q2M1K9 1284 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 IL27RAQ6UWB1 636 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 BEND5Q7L4P6 421 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 NAXDQ8IW45 347 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 FIBINQ8TAL6 211 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 DQX1Q8TE96 717 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 STK32AQ8WU08 396 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 FCRL2Q96LA5 508 aaPredicted RBP15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 INTS2Q9H0H0 1204 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 PRSS16Q9NQE7 514 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 ST7Q9NRC1 585 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 EIF2B4Q9UI10 523 aaKnown RBP15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 MSRB2Q9Y3D2 182 aa15.27■□□□□ 0.04
CCHCR1-229ENST00000512418 MED7O43513 233 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 DNTTP04053 509 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 ZNF883P0CG24 379 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 KRT5P13647 590 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 ACSL1P33121 698 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 AFF3P51826 1226 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 STX17P56962 302 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 RPS14P62263 151 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 TRIP6Q15654 476 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 TTC31Q49AM3 519 aaPredicted RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 NADSYN1Q6IA69 706 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 CCDC117Q8IWD4 279 aaPredicted RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 SCUBE3Q8IX30 993 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 C1orf216Q8TAB5 229 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 SNX19Q92543 992 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 SLC39A13Q96H72 371 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 LMLNQ96KR4 655 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 CAMK1GQ96NX5 476 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 BTBD1Q9H0C5 482 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 C6orf106Q9H6K1 298 aaPredicted RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 STIM2Q9P246 746 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 SUN2Q9UH99 717 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 KLK13Q9UKR3 277 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 NAALADL1Q9UQQ1 740 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 PCDHB9Q9Y5E1 797 aa15.26■□□□□ 0.03
CCHCR1-229ENST00000512418 AKAP13Q12802 2813 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 CHD6Q8TD26 2715 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 CAPN9O14815 690 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 FGFR1OPO95684 399 aaKnown RBP15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 SEMA4FO95754 770 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 ASLP04424 464 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 MATKP42679 507 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 ST8SIA6P61647 398 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 RPS24P62847 133 aaKnown RBP15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 CDH18Q13634 790 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 MS4A13Q5J8X5 152 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 ZNF776Q68DI1 518 aaPredicted RBP15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 ENOSF1Q7L5Y1 443 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 RAB44Q7Z6P3 723 aaPredicted RBP15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 TAC4Q86UU9 113 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 TTC17Q96AE7 1141 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 MYO19Q96H55 970 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 SLC4A5Q9BY07 1137 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 NUCKS1Q9H1E3 243 aaKnown RBP15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 GAREM1Q9H706 876 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 IL21RQ9HBE5 538 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 ZZEF1O43149 2961 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 NUMA1Q14980 2115 aa15.25■□□□□ 0.03
CCHCR1-229ENST00000512418 FAM221BA6H8Z2 402 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 LETM1O95202 739 aaPredicted RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 MOCS2O96007 188 aaPredicted RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 APOEP02649 317 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 GNA15P30679 374 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 CSKP41240 450 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 BNC1Q01954 994 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 HLA-BQ31612 363 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms