RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ENTPD5O75356 428 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 POLBP06746 335 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 SERPINA6P08185 405 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 IBSPP21815 317 aaPredicted RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 GRK2P25098 689 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ADRA1BP35368 520 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 AP1B1Q10567 949 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 SEMA3BQ13214 749 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 SPANXN3Q5MJ09 141 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 FAM182AQ5T1J6 154 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 MBLAC2Q68D91 279 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 CLEC20AQ6ZU45 233 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 OSTM1Q86WC4 334 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ZNF567Q8N184 647 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 SMG8Q8ND04 991 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ISL2Q96A47 359 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 MCUR1Q96AQ8 359 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 NAF1Q96HR8 494 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 APOL6Q9BWW8 343 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 C1orf21Q9H246 121 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 PRDM12Q9H4Q4 367 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 LRRC4Q9HBW1 653 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 KLK14Q9P0G3 267 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 STOML1Q9UBI4 398 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 MFHAS1Q9Y4C4 1052 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 UTRNP46939 3433 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 F8W8V4 182 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 MTSS1O43312 755 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 PLIN3O60664 434 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 ITGA2BP08514 1039 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 MGAT1P26572 445 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 HOXC8P31273 242 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 AQP5P55064 265 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 FKBP1BP68106 108 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 DEUP1Q05D60 604 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 IFRD2Q12894 506 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 PDE1CQ14123 709 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 HIC1Q14526 733 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 KHDC1Q4VXA5 237 aaKnown RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 FASTKD1Q53R41 847 aaKnown RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 GRTP1Q5TC63 336 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 CASC4Q6P4E1 433 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 DSTYKQ6XUX3 929 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 RINLQ6ZS11 566 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 TTC7BQ86TV6 843 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 ALYREFQ86V81 257 aaKnown RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 WDR75Q8IWA0 830 aaKnown RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 TMEM86AQ8N2M4 240 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 TEX9Q8N6V9 391 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 GPATCH11Q8N954 259 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 PIWIL2Q8TC59 973 aaKnown RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 PRR11Q96HE9 360 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 PPP1R10Q96QC0 940 aaKnown RBP9.49□□□□□ -0.89
CPNE4-210ENST00000512332 CPNE1Q99829 537 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 C20orf27Q9GZN8 174 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 XPNPEP3Q9NQH7 507 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 CNGB3Q9NQW8 809 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 RRN3Q9NYV6 651 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 TAGLN3Q9UI15 199 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 ADAM28Q9UKQ2 775 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 EMCNQ9ULC0 261 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 Q9Y3F1 56 aa9.49□□□□□ -0.89
CPNE4-210ENST00000512332 TSC2P49815 1807 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.48□□□□□ -0.89
CPNE4-210ENST00000512332 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 EEF2KO00418 725 aaKnown RBP9.48□□□□□ -0.89
CPNE4-210ENST00000512332 PTGESO14684 152 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 BEST1O76090 585 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 FYNP06241 537 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 MYL4P12829 197 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 AOC1P19801 751 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 PSMB4P28070 264 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 GP5P40197 560 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 MAGEA12P43365 314 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 PTDSS1P48651 473 aaKnown RBP9.48□□□□□ -0.89
CPNE4-210ENST00000512332 PSEN2P49810 448 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 RAB41Q5JT25 222 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 SYPL2Q5VXT5 272 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 TMEM135Q86UB9 458 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 ARRDC4Q8NCT1 418 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 TTC8Q8TAM2 541 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 VAT1Q99536 393 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 CCDC106Q9BWC9 280 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 LRRC40Q9H9A6 602 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 SPON1Q9HCB6 807 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 PIGVQ9NUD9 493 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 SLC38A7Q9NVC3 462 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 IQCA1LA6NCM1 817 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 C2orf71A6NGG8 1288 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 B2RBV5 119 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 TPP1O14773 563 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 TREHO43280 583 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 AP2A1O95782 977 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 F9P00740 461 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 SERPINE1P05121 402 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 FAM200BP0CF97 657 aa9.48□□□□□ -0.89
CPNE4-210ENST00000512332 FGF3P11487 239 aaPredicted RBP9.48□□□□□ -0.89
CPNE4-210ENST00000512332 GNAT1P11488 350 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms