RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ARHGEF19Q8IW93 802 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 MFN1Q8IWA4 741 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 SCUBE3Q8IX30 993 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 P2RY11Q96G91 374 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 SLC4A5Q9BY07 1137 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 MIS12Q9H081 205 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 THAP9Q9H5L6 903 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 POPDC2Q9HBU9 364 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 SGK2Q9HBY8 427 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 OSGEPQ9NPF4 335 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 TPX2Q9ULW0 747 aaKnown RBP14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 CLEC4EQ9ULY5 219 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 NCKAP1Q9Y2A7 1128 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 PCDHB9Q9Y5E1 797 aa14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 MAP1BP46821 2468 aaKnown RBP14.12□□□□□ -0.15
CCHCR1-227ENST00000508852 GIPC1O14908 333 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 BCAT2O15382 392 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 PROS1P07225 676 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 SRPRAP08240 638 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 ZNF883P0CG24 379 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 STX17P56962 302 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 YWHAZP63104 245 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 FOXC1Q12948 553 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 SLC12A1Q13621 1099 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 CDH18Q13634 790 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 ARID5BQ14865 1188 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 TEAD4Q15561 434 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 FAM133BQ5BKY9 247 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 TTC39BQ5VTQ0 682 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 FAM114A1Q8IWE2 563 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 ATP6V0D2Q8N8Y2 350 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 MLKLQ8NB16 471 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 DQX1Q8TE96 717 aaKnown RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 ZNF606Q8WXB4 792 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 KAT5Q92993 513 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 TTC17Q96AE7 1141 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 BTN2A3PQ96KV6 586 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 KREMEN1Q96MU8 473 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 ZSWIM1Q9BR11 485 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 CEP295Q9C0D2 2601 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 BTBD1Q9H0C5 482 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 SLC6A17Q9H1V8 727 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 ASNSD1Q9NWL6 643 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 KIAA1522Q9P206 1035 aaPredicted RBP14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 TJP2Q9UDY2 1190 aa14.11□□□□□ -0.15
CCHCR1-227ENST00000508852 TARSL2A2RTX5 802 aaKnown RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 KCNJ18B7U540 433 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 THAP12O43422 761 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 LETM1O95202 739 aaPredicted RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 NNMTP40261 264 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 AFF3P51826 1226 aaKnown RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 SIM1P81133 766 aaPredicted RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 PTK2Q05397 1052 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 SUZ12Q15022 739 aaKnown RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 TPD52L1Q16890 204 aaPredicted RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 EXOC3L4Q17RC7 722 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 MS4A13Q5J8X5 152 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 EFHC1Q5JVL4 640 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 ZNF776Q68DI1 518 aaPredicted RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 TRIM65Q6PJ69 517 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 USP30Q70CQ3 517 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 SORCS1Q8WY21 1168 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 SKA1Q96BD8 255 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 SLC39A13Q96H72 371 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 FCRL2Q96LA5 508 aaPredicted RBP14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 ADAM33Q9BZ11 813 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 MIR1-1HGQ9H1L0 117 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 APEX2Q9UBZ4 518 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 DACH1Q9UI36 760 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 NEUROG3Q9Y4Z2 214 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 CEP83Q9Y592 693 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 PCDHGB2Q9Y5G2 931 aa14.1□□□□□ -0.15
CCHCR1-227ENST00000508852 MUC22E2RYF6 1773 aaPredicted RBP14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 PIK3R2O00459 728 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 DFNA5O60443 496 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 GABBR2O75899 941 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 ABCB4P21439 1286 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 MATKP42679 507 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 BPIFB4P59827 614 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 CDK17Q00537 523 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 GRIK2Q13002 908 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 PTPRNQ16849 979 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 ACBD5Q5T8D3 534 aaPredicted RBP14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 RNF219Q5W0B1 726 aaPredicted RBP14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 RFWD3Q6PCD5 774 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 LRSAM1Q6UWE0 723 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 UNQ6494/PRO21346Q6UXR6 183 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 CLEC4CQ8WTT0 213 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 CYB5D2Q8WUJ1 264 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 ERLEC1Q96DZ1 483 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 PRSS16Q9NQE7 514 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 STIM2Q9P246 746 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 PCDHGC3Q9UN70 934 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 NAALADL1Q9UQQ1 740 aa14.09□□□□□ -0.15
CCHCR1-227ENST00000508852 F5H5T6 163 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 HSF2BPO75031 334 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 GADD45BO75293 160 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms