RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 UTP6Q9NYH9 597 aaKnown RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 STAP2Q9UGK3 403 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CIDEBQ9UHD4 219 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 CCNL1Q9UK58 526 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 DAAM1Q9Y4D1 1078 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 PAPPAQ13219 1627 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 WDR17Q8IZU2 1322 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 FNDC1Q4ZHG4 1894 aaPredicted RBP4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 TULP4Q9NRJ4 1543 aa4.92□□□□□ -1.62
PDLIM5-211ENST00000508531 TCHHQ07283 1943 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 TARM1B6A8C7 271 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 GABRDO14764 452 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CHEK2O96017 543 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 PDHA1P08559 390 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 PRR35P0CG20 571 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 ITGALP20701 1170 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CD6P30203 668 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 GUCY2FP51841 1108 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 EIF2B5Q13144 721 aaKnown RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 XRCC4Q13426 336 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 BMPR2Q13873 1038 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 KRT32Q14532 448 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 ODF1Q14990 250 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CAMK4Q16566 473 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 SPECC1Q5M775 1068 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 NAA16Q6N069 864 aaPredicted RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CYB5D1Q6P9G0 228 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 EMBQ6PCB8 327 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CWC27Q6UX04 472 aaKnown RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 OLFM4Q6UX06 510 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 SYNE3Q6ZMZ3 975 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF551Q7Z340 670 aaPredicted RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 LCA5Q86VQ0 697 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC65Q8IXS2 484 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC13Q8IYE1 715 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 GALNT15Q8N3T1 639 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF366Q8N895 744 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 B4GALNT2Q8NHY0 566 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 FAM136AQ96C01 138 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 PANX2Q96RD6 677 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 NAPGQ99747 312 aaPredicted RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 SH3GL2Q99962 352 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 LLPHQ9BRT6 129 aaKnown RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 KIF9Q9HAQ2 790 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 SPC25Q9HBM1 224 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 GPR35Q9HC97 309 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 PAPOLBQ9NRJ5 636 aaKnown RBP4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 SERTAD4Q9NUC0 356 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 ABCF2Q9UG63 623 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 TMCO1Q9UM00 188 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 TNNQ9UQP3 1299 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 WDR37Q9Y2I8 494 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 PCDHA3Q9Y5H8 950 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF804BA4D1E1 1349 aa4.91□□□□□ -1.62
PDLIM5-211ENST00000508531 NSD3Q9BZ95 1437 aa4.9□□□□□ -1.62
PDLIM5-211ENST00000508531 LMO7Q8WWI1 1683 aa4.9□□□□□ -1.62
PDLIM5-211ENST00000508531 VWA3AA6NCI4 1184 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 HMGB1P1B2RPK0 211 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 MGRN1O60291 552 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 HSF2BPO75031 334 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 KATNA1O75449 491 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SOAT2O75908 522 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM107AO95990 144 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SERPINC1P01008 464 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PENKP01210 267 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 RARBP10826 455 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 HSPA8P11142 646 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 JUPP14923 745 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 NDUFB7P17568 137 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CCND1P24385 295 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PCSK6P29122 969 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PRDX5P30044 214 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PIP4K2AP48426 406 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PIK3CGP48736 1102 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 TOB1P50616 345 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CCT4P50991 539 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 AK2P54819 239 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 ADKP55263 362 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 GNGT1P63211 74 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 MYL5Q02045 173 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 TRIM14Q14142 442 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SGSM1Q2NKQ1 1148 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 TBC1D25Q3MII6 688 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PLEKHO1Q53GL0 409 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 GLE1Q53GS7 698 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 LACTB2Q53H82 288 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC92Q53HC0 331 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC181Q5TID7 509 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF626Q68DY1 528 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 MIS18BP1Q6P0N0 1132 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 ARMCX5Q6P1M9 558 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 KDM7AQ6ZMT4 941 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 VSTM4Q8IW00 320 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 DHX40Q8IX18 779 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CNTROBQ8N137 903 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 KLHDC4Q8TBB5 520 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CUL5Q93034 780 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms