RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 METAP1DQ6UB28 335 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 MIER3Q7Z3K6 550 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 VASH2Q86V25 355 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ZNF679Q8IYX0 411 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 CORO2AQ92828 525 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 BTBD6Q96KE9 485 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 MTRQ99707 1265 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 SACM1LQ9NTJ5 587 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 KLHL14Q9P2G3 628 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ASH2LQ9UBL3 628 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 DERAQ9Y315 318 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ITSN2Q9NZM3 1697 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 C15orf38-AP3S2A0A0A6YYH1 394 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 VWA3AA6NCI4 1184 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 TARM1B6A8C7 271 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ATP2A1O14983 1001 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 SHOXO15266 292 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PRPF4O43172 522 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 MSCO60682 206 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 MMP20O60882 483 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 UBOX5O94941 541 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 OR5F1O95221 314 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ONECUT2O95948 504 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 B3GALT4O96024 378 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 URODP06132 367 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 CD247P20963 164 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 GABRB3P28472 473 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 NME5P56597 212 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 CLN3Q13286 438 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 NFIXQ14938 502 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ARHGAP19Q14CB8 494 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ZBTB41Q5SVQ8 909 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 RIPPLY2Q5TAB7 128 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ESRP1Q6NXG1 681 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PDZD3Q86UT5 571 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 SLC43A2Q8N370 569 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 BCL7CQ8WUZ0 217 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 MASTLQ96GX5 879 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PNMA5Q96PV4 448 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 FAM83CQ9BQN1 747 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 ANO3Q9BYT9 981 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 RAB20Q9NX57 234 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PLA2G3Q9NZ20 509 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 MARCH4Q9P2E8 410 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PCDHA4Q9UN74 947 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 TBC1D30Q9Y2I9 924 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 CBY1Q9Y3M2 126 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 PHLPP2Q6ZVD8 1323 aa7.76□□□□□ -1.17
PDGFRA-206ENST00000508170 H3BUI4 141 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 POTEB2H3BUK9 544 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 DNALI1O14645 258 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ETS1P14921 441 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ATP5JP18859 108 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 CCR10P46092 362 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 CRKLP46109 303 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 STARP49675 285 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 TPM4P67936 248 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 NKX6-1P78426 367 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 RAPSNQ13702 412 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ARHGAP44Q17R89 818 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 LEXMQ3ZCV2 418 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ANKRD20A4Q4UJ75 823 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ANKRD20A8PQ5CZ79 823 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ANKRD20A2Q5SQ80 823 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ANKRD20A1Q5TYW2 823 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ANKRD20A3Q5VUR7 823 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 POTEHQ6S545 545 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 DDIASQ8IXT1 998 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 NFKBIDQ8NI38 313 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 TRAPPC9Q96Q05 1148 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 RTKNQ9BST9 563 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 TUBB6Q9BUF5 446 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 BOCQ9BWV1 1114 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 CRNKL1Q9BZJ0 848 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ADAM7Q9H2U9 754 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 CHODLQ9H9P2 273 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 SERHLQ9NQF3 203 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ATP6V1HQ9UI12 483 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 CPA4Q9UI42 421 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 MSRAQ9UJ68 235 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 COLQQ9Y215 455 aaPredicted RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 SPACA6W5XKT8 324 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 CLCA1A8K7I4 914 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 STX16O14662 325 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ST8SIA5O15466 376 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 GLAP06280 429 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 PSMC2P35998 433 aaKnown RBP7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 MGAT5Q09328 741 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ASPHQ12797 758 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 ZNF124Q15973 351 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 KCNA10Q16322 511 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 RAB41Q5JT25 222 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 LIN9Q5TKA1 542 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 FSTL4Q6MZW2 842 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 USP17L6PQ6QN14 398 aa7.75□□□□□ -1.17
PDGFRA-206ENST00000508170 DNAAF5Q86Y56 855 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms