RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 A0A1W2PP55 124 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 EIF3DO15371 548 aaKnown RBP eCLIP14.49□□□□□ -0.09
DDR1-260ENST00000507533 STX6O43752 255 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 RNASEH1O60930 286 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 RNASEH2AO75792 299 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 DXOO77932 396 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 KIF20AO95235 890 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 ATP5BP06576 529 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 PABPC1P11940 636 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 TRIM21P19474 475 aaKnown RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 CCR5P51681 352 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 ERVPABLB-1P60509 514 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 COLEC12Q5KU26 742 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 KIAA1614Q5VZ46 1190 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 BRAPQ7Z569 592 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 KIAA0907Q7Z7F0 614 aaPredicted RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 AHI1Q8N157 1196 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.49□□□□□ -0.09
DDR1-260ENST00000507533 ZNF507Q8TCN5 953 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 CYFIP2Q96F07 1278 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 OMDQ99983 421 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 TRIM4Q9C037 500 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 FBXO2Q9UK22 296 aaPredicted RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 MTMR6Q9Y217 621 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 HEMK1Q9Y5R4 338 aaPredicted RBP14.49□□□□□ -0.09
DDR1-260ENST00000507533 USP3Q9Y6I4 520 aa14.49□□□□□ -0.09
DDR1-260ENST00000507533 MYH10P35580 1976 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 MID1O15344 667 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 SIGLEC6O43699 453 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 USP12O75317 370 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 VNN1O95497 513 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 C4BPAP04003 597 aaKnown RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 POLR2EP19388 210 aaKnown RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 LSSP48449 732 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 AP3M2P53677 418 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 DAB2P98082 770 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 RSRC2Q7L4I2 434 aaKnown RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 EPM2AIP1Q7L775 607 aaPredicted RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 SPATS2Q86XZ4 545 aaKnown RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 PLEKHO2Q8TD55 490 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 PLD4Q96BZ4 506 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 TMA16Q96EY4 203 aaKnown RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
DDR1-260ENST00000507533 FAM117AQ9C073 453 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 POLR1BQ9H9Y6 1135 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 SRPRBQ9Y5M8 271 aaKnown RBP14.48□□□□□ -0.09
DDR1-260ENST00000507533 CLIC4Q9Y696 253 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 PLXNA2O75051 1894 aa14.48□□□□□ -0.09
DDR1-260ENST00000507533 A0A087X0B3 334 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 K7ENP7 123 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 TRIM38O00635 465 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 SDC3O75056 442 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 SIN3BO75182 1162 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 SNRPFP62306 86 aaKnown RBP14.47□□□□□ -0.09
DDR1-260ENST00000507533 EHHADHQ08426 723 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 ZNF211Q13398 564 aaPredicted RBP14.47□□□□□ -0.09
DDR1-260ENST00000507533 CST6Q15828 149 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 SGSM1Q2NKQ1 1148 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 CDCP2Q5VXM1 449 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 INO80CQ6PI98 192 aaPredicted RBP14.47□□□□□ -0.09
DDR1-260ENST00000507533 NELFCDQ8IXH7 590 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 MFSD2AQ8NA29 543 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 VCPIP1Q96JH7 1222 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 DEPDC7Q96QD5 511 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 TWNKQ96RR1 684 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 THSD1Q9NS62 852 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 FZD4Q9ULV1 537 aa14.47□□□□□ -0.09
DDR1-260ENST00000507533 UBR5O95071 2799 aaPredicted RBP14.46□□□□□ -0.09
DDR1-260ENST00000507533 LRRIQ3A6PVS8 624 aaPredicted RBP14.46□□□□□ -0.09
DDR1-260ENST00000507533 C10orf142B7Z368 130 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 OPA1O60313 960 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 EXOC3O60645 756 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 NTRK1P04629 796 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 SLC8A1P32418 973 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 HARS2P49590 506 aaKnown RBP14.46□□□□□ -0.09
DDR1-260ENST00000507533 ST8SIA6P61647 398 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 NFATC3Q12968 1075 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 TRIP4Q15650 581 aaPredicted RBP14.46□□□□□ -0.09
DDR1-260ENST00000507533 MMAAQ8IVH4 418 aaKnown RBP14.46□□□□□ -0.09
DDR1-260ENST00000507533 ARHGAP18Q8N392 663 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 PARD3BQ8TEW8 1205 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 DUSP16Q9BY84 665 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 ZSCAN16Q9H4T2 348 aaPredicted RBP14.46□□□□□ -0.09
DDR1-260ENST00000507533 ASCL3Q9NQ33 180 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
DDR1-260ENST00000507533 CSO75390 466 aaKnown RBP14.45□□□□□ -0.1
DDR1-260ENST00000507533 CD70P32970 193 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 ASPAP45381 313 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 ZNF445P59923 1031 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 YWHAGP61981 247 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDR1-260ENST00000507533 CLDN10P78369 228 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 PTPN13Q12923 2485 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 HNRNPA1L2Q32P51 320 aaKnown RBP14.45□□□□□ -0.1
DDR1-260ENST00000507533 HS1BP3Q53T59 392 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 SPOPLQ6IQ16 392 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 NAPEPLDQ6IQ20 393 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDR1-260ENST00000507533 TMC6Q7Z403 805 aa14.45□□□□□ -0.1
DDR1-260ENST00000507533 SLC25A45Q8N413 288 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms