RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 GRIK2Q13002 908 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 FAM124AQ86V42 546 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 CACUL1Q86Y37 369 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 ZCCHC9Q8N567 271 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 DQX1Q8TE96 717 aaKnown RBP12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 TTC17Q96AE7 1141 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 MED15Q96RN5 788 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 PRSS16Q9NQE7 514 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 NAALADL1Q9UQQ1 740 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 PCDHB9Q9Y5E1 797 aa12.52□□□□□ -0.41
PDLIM7-214ENST00000505746 PLXND1Q9Y4D7 1925 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 TMEM8BA6NDV4 472 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 C1QTNF9BB2RNN3 333 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 SH3BP5O60239 455 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 GJB3O75712 270 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 TOP3BO95985 862 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 C1QTNF9P0C862 333 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 RPS14P62263 151 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 SFSWAPQ12872 951 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 CDH18Q13634 790 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 ZNF423Q2M1K9 1284 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 TTC31Q49AM3 519 aaPredicted RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 DENND1BQ6P3S1 775 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 TMEM110Q86TL2 294 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 CREBRFQ8IUR6 639 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 ZNF366Q8N895 744 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 WFDC5Q8TCV5 224 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC39A13Q96H72 371 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 POPDC2Q9HBU9 364 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 EIF2B4Q9UI10 523 aaKnown RBP12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 SCML1Q9UN30 329 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 NCKAP1Q9Y2A7 1128 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 NEUROG3Q9Y4Z2 214 aa12.51□□□□□ -0.41
PDLIM7-214ENST00000505746 NUP205Q92621 2012 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 THAP12O43422 761 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 HYAL3O43820 417 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 RNASEH1O60930 286 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 MOCS3O95396 460 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 CER1O95813 267 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 APOEP02649 317 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 ZNF883P0CG24 379 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 GNA15P30679 374 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 ACSL1P33121 698 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 MATKP42679 507 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 AFF3P51826 1226 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 TEAD4Q15561 434 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 TRIP6Q15654 476 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 SYPL2Q5VXT5 272 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 ZNF776Q68DI1 518 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 SMYD5Q6GMV2 418 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 NAXDQ8IW45 347 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 CARNMT1Q8N4J0 409 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 KDM1BQ8NB78 822 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 SNX19Q92543 992 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 LMLNQ96KR4 655 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 PRICKLE1Q96MT3 831 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 GAREM1Q9H706 876 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 SGK2Q9HBY8 427 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 KIAA1522Q9P206 1035 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 TJP2Q9UDY2 1190 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 ACACBO00763 2458 aa12.5□□□□□ -0.41
PDLIM7-214ENST00000505746 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 E5RJQ4 531 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 LUC7L3O95232 432 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 SEMA4FO95754 770 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 TRUB2O95900 331 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 USP8P40818 1118 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 CSKP41240 450 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 UBE2HP62256 183 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 RPS24P62847 133 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 FAM193AP78312 1265 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 DCAF6Q58WW2 860 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 TRIM65Q6PJ69 517 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 GBP6Q6ZN66 633 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 USP30Q70CQ3 517 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 TAC4Q86UU9 113 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 LGI2Q8N0V4 545 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 CFAP52Q8N1V2 620 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 ATP6V0D2Q8N8Y2 350 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 C1orf216Q8TAB5 229 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 BTN2A3PQ96KV6 586 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms