RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CFAP46Q8IYW2 2715 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 KCNK3O14649 394 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 ZBED1O96006 694 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 IL12RB1P42701 662 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 GRIA4P48058 902 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 PMS1P54277 932 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 LRRC63Q05C16 580 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 PDE4CQ08493 712 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 E2F5Q15329 346 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 SIX6OS1Q8N1H7 587 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 SNIP1Q8TAD8 396 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 NRSN2Q9GZP1 204 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 THAP10Q9P2Z0 257 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 AGO1Q9UL18 857 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 MYO18BQ8IUG5 2567 aa16.72■□□□□ 0.27
PDLIM7-213ENST00000505074 H0Y8X5 98 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 ERVH48-1M5A8F1 160 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 PSMA7O14818 248 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 DFNA5O60443 496 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 KLKB1P03952 638 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 ARID5AQ03989 594 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 ADIGQ0VDE8 80 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 BST2Q10589 180 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 ENPP2Q13822 863 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 RTP5Q14D33 572 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 TAF1BQ53T94 588 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 FAM124AQ86V42 546 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 ZNF276Q8N554 614 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 UBA3Q8TBC4 463 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 DDI1Q8WTU0 396 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 NDRG1Q92597 394 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 GTPBP4Q9BZE4 634 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 UBXN6Q9BZV1 441 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 CLMPQ9H6B4 373 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 TM9SF3Q9HD45 589 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 FBXO10Q9UK96 956 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 SLC27A6Q9Y2P4 619 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 SLCO1B1Q9Y6L6 691 aa16.71■□□□□ 0.27
PDLIM7-213ENST00000505074 NUMA1Q14980 2115 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 TULP2O00295 520 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 ENC1O14682 589 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 XPO1O14980 1071 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 PAPSS1O43252 624 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 RFPL3O75679 317 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 C1SP09871 688 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 LCP1P13796 627 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 COPAP53621 1224 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 MFAP3P55082 362 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 CXADRP78310 365 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 NUCB2P80303 420 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 TARDBPQ13148 414 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 GEN1Q17RS7 908 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 COBLL1Q53SF7 1204 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 RAB41Q5JT25 222 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 FYB2Q5VWT5 728 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 PCSK4Q6UW60 755 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 ANKS1BQ7Z6G8 1248 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 CACUL1Q86Y37 369 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 EDEM1Q92611 657 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 FGF11Q92914 225 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 PLD4Q96BZ4 506 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 CIPCQ9C0C6 399 aa16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 OLA1Q9NTK5 396 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-213ENST00000505074 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 TSPAN3O60637 253 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 PENKP01210 267 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 VDRP11473 427 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 HARS2P49590 506 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 IL9RQ01113 521 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 TMEM270Q6UE05 265 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 ZC3H3Q8IXZ2 948 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 SLC35C1Q96A29 364 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 NT5C1BQ96P26 610 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 C6orf106Q9H6K1 298 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 METTL14Q9HCE5 456 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 PCDHB4Q9Y5E5 795 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 COL6A6A6NMZ7 2263 aa16.69■□□□□ 0.26
PDLIM7-213ENST00000505074 PIK3R2O00459 728 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 LDOC1O95751 146 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 EPHX1P07099 455 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 SETSIPP0DME0 302 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 ACTN2P35609 894 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 CTSKP43235 329 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 FMO5P49326 533 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 RGS7P49802 495 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 CLDN6P56747 220 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 TLE3Q04726 772 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 CETN1Q12798 172 aa16.68■□□□□ 0.26
PDLIM7-213ENST00000505074 ZNF234Q14588 700 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms