RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 A0A1W2PP55 124 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 RNASEH2AO75792 299 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 POLR2EP19388 210 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 DAB2P98082 770 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 EPM2AIP1Q7L775 607 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 KIAA0907Q7Z7F0 614 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 ARHGAP18Q8N392 663 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 TMA16Q96EY4 203 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 LRRC27Q9C0I9 530 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 SERGEFQ9UGK8 458 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 FZD4Q9ULV1 537 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 NYNRINQ9P2P1 1898 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-210ENST00000503827 MID1O15344 667 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 EXOC3O60645 756 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 VNN1O95497 513 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 C4BPAP04003 597 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 LSSP48449 732 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 HARS2P49590 506 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 ST8SIA6P61647 398 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 CST6Q15828 149 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 HS1BP3Q53T59 392 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 NELFCDQ8IXH7 590 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 MFSD2AQ8NA29 543 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 TAF4BQ92750 862 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 DEPDC7Q96QD5 511 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 FAM117AQ9C073 453 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 MTG2Q9H4K7 406 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 POLR1BQ9H9Y6 1135 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 THSD1Q9NS62 852 aa16.49■□□□□ 0.23
PDLIM7-210ENST00000503827 UBE4BO95155 1302 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 LRRIQ3A6PVS8 624 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 SIGLEC6O43699 453 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 MAGEC1O60732 1142 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 USP12O75317 370 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 NTRK1P04629 796 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 ZNF211Q13398 564 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 TRIP4Q15650 581 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 ZC3H3Q8IXZ2 948 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 PLEKHO2Q8TD55 490 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 NT5C1AQ9BXI3 368 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 DUSP16Q9BY84 665 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 DNAI2Q9GZS0 605 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 TNMDQ9H2S6 317 aa16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-210ENST00000503827 PTPN13Q12923 2485 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 TDRD6O60522 2096 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 A0A087X0B3 334 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 K7ENP7 123 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 SIN3BO75182 1162 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 KRT10P13645 584 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 SLC8A1P32418 973 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 YWHAGP61981 247 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 CLDN10P78369 228 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 FAM26FQ5R3K3 315 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 CDCP2Q5VXM1 449 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 KIAA1614Q5VZ46 1190 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 NAPEPLDQ6IQ20 393 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 INO80CQ6PI98 192 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 SND1Q7KZF4 910 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 MMAAQ8IVH4 418 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 C12orf56Q8IXR9 622 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 PDILTQ8N807 584 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 OR14C36Q8NHC7 312 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 VCPIP1Q96JH7 1222 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 TWNKQ96RR1 684 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 SMC3Q9UQE7 1217 aa16.47■□□□□ 0.23
PDLIM7-210ENST00000503827 C10orf142B7Z368 130 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 TRIM38O00635 465 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 OPA1O60313 960 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 SDC3O75056 442 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 CD70P32970 193 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 ASPAP45381 313 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 ASIC1P78348 528 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 EHHADHQ08426 723 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 NFATC3Q12968 1075 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 HNRNPA1L2Q32P51 320 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 PRPF39Q86UA1 669 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 IQCHQ86VS3 1027 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 ZNF557Q8N988 423 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 TMX3Q96JJ7 454 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 TRIM4Q9C037 500 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 OLA1Q9NTK5 396 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 TFIP11Q9UBB9 837 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 STOML2Q9UJZ1 356 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
PDLIM7-210ENST00000503827 DOCK9Q9BZ29 2069 aa16.46■□□□□ 0.22
PDLIM7-210ENST00000503827 TBC1D3DA0A087WVF3 549 aa16.45■□□□□ 0.22
PDLIM7-210ENST00000503827 TBC1D3IA0A087WXS9 549 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms