RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 IGSF8Q969P0 613 aa17.53■□□□□ 0.4
TRAPPC3-207ENST00000497251 SKA1Q96BD8 255 aa17.53■□□□□ 0.4
TRAPPC3-207ENST00000497251 ERLEC1Q96DZ1 483 aa17.53■□□□□ 0.4
TRAPPC3-207ENST00000497251 ABCB8Q9NUT2 735 aa17.53■□□□□ 0.4
TRAPPC3-207ENST00000497251 NCKAP1Q9Y2A7 1128 aa17.53■□□□□ 0.4
TRAPPC3-207ENST00000497251 FREM2Q5SZK8 3169 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 PAPSS1O43252 624 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 TSPAN3O60637 253 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 RNASEH1O60930 286 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 SEMA4FO95754 770 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 ST8SIA6P61647 398 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 SCAPQ12770 1279 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 STIM1Q13586 685 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 NUMA1Q14980 2115 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 PTPRNQ16849 979 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 PIK3R6Q5UE93 754 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 MBLAC2Q68D91 279 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 ZNF776Q68DI1 518 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 FOXR2Q6PJQ5 311 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 BEND5Q7L4P6 421 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 TMPRSS7Q7RTY8 843 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 UBR7Q8N806 425 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 FIBINQ8TAL6 211 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 SPATA20Q8TB22 786 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 RHBDD1Q8TEB9 315 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 EDEM1Q92611 657 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 SLC35C1Q96A29 364 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 TTC17Q96AE7 1141 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 EEF2KMTQ96G04 330 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 CCDC86Q9H6F5 360 aaKnown RBP17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 PRSS16Q9NQE7 514 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 SFMBT1Q9UHJ3 866 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 LHX6Q9UPM6 363 aa17.52■□□□□ 0.4
TRAPPC3-207ENST00000497251 TULP2O00295 520 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 CDK4P11802 303 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 ACSL1P33121 698 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 GRK6P43250 576 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 RPS14P62263 151 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 HJURPQ8NCD3 748 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 UBA3Q8TBC4 463 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 CEP63Q96MT8 703 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 NT5C1BQ96P26 610 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 RSPH9Q9H1X1 276 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 GOLPH3LQ9H4A5 285 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 ANKRD6Q9Y2G4 727 aa17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 FNDC3AQ9Y2H6 1198 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-207ENST00000497251 A0A1B0GVT2 93 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 E9PAM4 449 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 PSMA7O14818 248 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 TNFSF14O43557 240 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 ACSL4O60488 711 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 LTFP02788 710 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 HLA-EP13747 358 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 CSNK1EP49674 416 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 TBX4P57082 545 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 RACK1P63244 317 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 BNC1Q01954 994 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 MEA1Q16626 185 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 SMYD5Q6GMV2 418 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 SLCO6A1Q86UG4 719 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 FAM124AQ86V42 546 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 FMR1NBQ8N0W7 255 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 CYB5D2Q8WUJ1 264 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 SNX19Q92543 992 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 NDRG1Q92597 394 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 DHTKD1Q96HY7 919 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 TIGD1Q96MW7 591 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 SERPINB11Q96P15 392 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 C6orf106Q9H6K1 298 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 TM9SF3Q9HD45 589 aa17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRAPPC3-207ENST00000497251 ASXL3Q9C0F0 2248 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 TARSL2A2RTX5 802 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 TAF4O00268 1085 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 MOCS3O95396 460 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 ACADSBP45954 432 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 FMO5P49326 533 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 CCT8P50990 548 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 KIF19Q2TAC6 998 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 HNRNPA1L2Q32P51 320 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 PMF1Q6P1K2 205 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 MFN1Q8IWA4 741 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 SMARCE1Q969G3 411 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 BIRC7Q96CA5 298 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 IL21RQ9HBE5 538 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 TLR6Q9Y2C9 796 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 PCDHB4Q9Y5E5 795 aa17.49■□□□□ 0.39
TRAPPC3-207ENST00000497251 VILLO15195 856 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 YKT6O15498 198 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 TBL1XO60907 577 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 SRPRAP08240 638 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 LCP1P13796 627 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 RPL34P49207 117 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 GCNT1Q02742 428 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 MTA1Q13330 715 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms