RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FZD3Q9NPG1 666 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ANO2Q9NQ90 1003 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 OSER1Q9NX31 292 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ACSL6Q9UKU0 697 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 NCKAP1Q9Y2A7 1128 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 DIDO1Q9BTC0 2240 aaKnown RBP9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ACANP16112 2415 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 NPHP3-ACAD11A0A0J9YXS1 232 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 LRRC72A6NJI9 287 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 TCP11X1B4DZS4 312 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 C9orf172C9J069 976 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 ANKRD63C9JTQ0 380 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 GABRDO14764 452 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 NPC1O15118 1278 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 NEMFO60524 1076 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 TLR5O60602 858 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 PENKP01210 267 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 PDGFAP04085 211 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 RPA1P27694 616 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 PDIA3P30101 505 aaKnown RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 PPP3CCP48454 512 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 LIG4P49917 911 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 CCR5P51681 352 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 ADPRHP54922 357 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 ARID5AQ03989 594 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 TESK1Q15569 626 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 ZXDCQ2QGD7 858 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 SLC45A4Q5BKX6 768 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 NUGGCQ68CJ6 796 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 Q6ZNB5 142 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 KCNK18Q7Z418 384 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 MMAAQ8IVH4 418 aaKnown RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 SYT2Q8N9I0 419 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 DPEP3Q9H4B8 488 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 NLGN3Q9NZ94 848 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 PPM1HQ9ULR3 514 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 KIAA1024Q9UPX6 916 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
GARNL3-219ENST00000495172 ATRQ13535 2644 aa9.32□□□□□ -0.92
GARNL3-219ENST00000495172 RTTNQ86VV8 2226 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3DA0A087WVF3 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3IA0A087WXS9 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3EA0A087X179 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3KA0A087X1G2 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3FA6NER0 549 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3LB9A6J9 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 NVLO15381 856 aaKnown RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 HNRNPRO43390 633 aaKnown RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 SIN3BO75182 1162 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 DEXIO95424 95 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 NADKO95544 446 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 HMBSP08397 361 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3HP0C7X1 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 JMJD7P0C870 316 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 PRLRP16471 622 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 PAX3P23760 479 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 CCT6AP40227 531 aaKnown RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 PSMD8P48556 350 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 KCNMA1Q12791 1236 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 SPIDRQ14159 915 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 DEFB109BQ30KR1 87 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3GQ6DHY5 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3CQ6IPX1 549 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TP53INP2Q8IXH6 220 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 TBC1D3Q8IZP1 549 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 C1orf127Q8N9H9 656 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 OR6B3Q8NGW1 331 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 C8orf48Q96LL4 319 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 LURAP1Q96LR2 239 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 OMDQ99983 421 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 CCDC3Q9BQI4 270 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 CALN1Q9BXU9 219 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 RSPH9Q9H1X1 276 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 DDX19AQ9NUU7 478 aaKnown RBP9.31□□□□□ -0.92
GARNL3-219ENST00000495172 LUZP4Q9P127 313 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 LOXL2Q9Y4K0 774 aa9.31□□□□□ -0.92
GARNL3-219ENST00000495172 STAB1Q9NY15 2570 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 NYNRINQ9P2P1 1898 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 UNC13CQ8NB66 2214 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 A0A0B4J269 797 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 EFCAB7A8K855 629 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 HNRNPDLO14979 420 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 SCAMP1O15126 338 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 ALPPL2P10696 532 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 PCSK1P29120 753 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 HLA-FP30511 346 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 NUMBP49757 651 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 ARSDP51689 593 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 CLDN2P57739 230 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 ZBTB16Q05516 673 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 SFSWAPQ12872 951 aaKnown RBP9.3□□□□□ -0.92
GARNL3-219ENST00000495172 STK3Q13188 491 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 CST6Q15828 149 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 OR6B2Q6IFH4 312 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 USP30Q70CQ3 517 aa9.3□□□□□ -0.92
GARNL3-219ENST00000495172 CHST9Q7L1S5 443 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms