RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 THBS4P35443 961 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 PBX1P40424 430 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 JAK3P52333 1124 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 CFHR1Q03591 330 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 HLTFQ14527 1009 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 SHC4Q6S5L8 630 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 KRT73Q86Y46 540 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 CCDC28AQ8IWP9 274 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 CCAR1Q8IX12 1150 aaKnown RBP5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 NANOGP1Q8N7R0 232 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 CCDC150Q8NCX0 1101 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 C16orf52Q8NHV5 167 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 PRR11Q96HE9 360 aaPredicted RBP5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 ADGRE3Q9BY15 652 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 STARD7Q9NQZ5 370 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 SEMA5BQ9P283 1151 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 ANKRD30AQ9BXX3 1397 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 NAIPQ13075 1403 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 TNS3Q68CZ2 1445 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 PRAG1Q86YV5 1406 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 ANKRD50Q9ULJ7 1429 aa5.38□□□□□ -1.55
SMARCC1-207ENST00000485833 KIF1AQ12756 1690 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 IFT172Q9UG01 1749 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 IDEP14735 1019 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 NR4A2P43354 598 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 WDR5P61964 334 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 YPEL5P62699 121 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 RAE1P78406 368 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 LAMB3Q13751 1172 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 KCNJ12Q14500 433 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 KPNB1Q14974 876 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 KIAA0408Q6ZU52 694 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 MRPL10Q7Z7H8 261 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 ZNF366Q8N895 744 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 SIGLEC11Q96RL6 698 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 TBCBQ99426 244 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 NUAK2Q9H093 628 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 GJB4Q9NTQ9 266 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 MTMR4Q9NYA4 1195 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 AFG3L2Q9Y4W6 797 aa5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 COL14A1Q05707 1796 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-207ENST00000485833 HOXD9P28356 352 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 GABRB3P28472 473 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 HSF1Q00613 529 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 ID2Q02363 134 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 ZNF91Q05481 1191 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 DEF8Q6ZN54 512 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 PJA1Q8NG27 643 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 HMCESQ96FZ2 354 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 SNX27Q96L92 541 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 NAA15Q9BXJ9 866 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 EIF2AQ9BY44 585 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 RNF26Q9BY78 433 aaPredicted RBP5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 ABHD10Q9NUJ1 306 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 ARL8BQ9NVJ2 186 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 SPATA31A5Q5VU36 1347 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 SPATA31A7Q8IWB4 1347 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 TECPR2O15040 1411 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 ALS2Q96Q42 1657 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 PEAK1Q9H792 1746 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 SBF2Q86WG5 1849 aa5.36□□□□□ -1.55
SMARCC1-207ENST00000485833 CCDC144AA2RUR9 1427 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 OR2W5A6NFC9 320 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 SOCS2O14508 198 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 INPPL1O15357 1258 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 EGR1P18146 543 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 DRD1P21728 446 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 RPS13P62277 151 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 PMS2P11Q13670 270 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 SLC5A9Q2M3M2 681 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 FAM90A2PQ658T7 463 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 TLDC1Q6P9B6 456 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 CLASRPQ8N2M8 674 aaKnown RBP5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 SYT17Q9BSW7 474 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 PCDHAC1Q9H158 963 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 RXFP3Q9NSD7 469 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 ZMYND8Q9ULU4 1186 aaPredicted RBP5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 MAN2B2Q9Y2E5 1009 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 PCDHB2Q9Y5E7 798 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 PCNTO95613 3336 aa5.35□□□□□ -1.55
SMARCC1-207ENST00000485833 PPLO60437 1756 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 DLC1Q96QB1 1528 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 PARD3Q8TEW0 1356 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 ZMYM2Q9UBW7 1377 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 RRHO14718 337 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 NDST3O95803 873 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 MYL3P08590 195 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 CTSAP10619 480 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 MATN1P21941 496 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 GNALP38405 381 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 BFSP2Q13515 415 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 ATP1A4Q13733 1029 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms