RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 PIH1D3Q9NQM4 214 aaKnown RBP4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 GPR27Q9NS67 375 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 INTS13Q9NVM9 706 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 AATFQ9NY61 560 aaKnown RBP eCLIP4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 ETAA1Q9NY74 926 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 TMOD3Q9NYL9 352 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 TBC1D7Q9P0N9 293 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 SUCLA2Q9P2R7 463 aaPredicted RBP4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 RPS6KA6Q9UK32 745 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 POLHQ9Y253 713 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 CARD8Q9Y2G2 431 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 SIK3Q9Y2K2 1263 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 TRAF6Q9Y4K3 522 aa4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 TNPO3Q9Y5L0 923 aaKnown RBP4.23□□□□□ -1.73
PRPF38B-205ENST00000485810 A0A087WWV3 80 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TRAV20A0A0B4J274 112 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 VWA3AA6NCI4 1184 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 LRRIQ4A6NIV6 560 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TRAF5O00463 557 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 NKRFO15226 690 aaKnown RBP eCLIP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SEC22BO75396 215 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ITGB1P05556 798 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ATP5BP06576 529 aaKnown RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TUBBP07437 444 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 JMJD7P0C870 316 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PDHBP11177 359 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 CYP19A1P11511 503 aaPredicted RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 MARCKSP29966 332 aaPredicted RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SOX6P35712 828 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PEX5P50542 639 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TOB1P50616 345 aaPredicted RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PLCD1P51178 756 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 IL2P60568 153 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 CCNA1P78396 465 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 RBP5P82980 135 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 GBE1Q04446 702 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ADCY2Q08462 1091 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PNOCQ13519 176 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SEC23AQ15436 765 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF674Q2M3X9 581 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 INAVAQ3KP66 663 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 C2orf76Q3KRA6 126 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 METTL11BQ5VVY1 283 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SPECC1LQ69YQ0 1117 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 IYDQ6PHW0 289 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 IL27RAQ6UWB1 636 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 LBX2Q6XYB7 198 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SYT10Q6XYQ8 523 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 APTXQ7Z2E3 356 aaKnown RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SPATA24Q86W54 205 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 CEP97Q8IW35 865 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SCUBE1Q8IWY4 988 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 DNAJC10Q8IXB1 793 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 DIS3L2Q8IYB7 885 aaKnown RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SYTL1Q8IYJ3 562 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TTLL6Q8N841 843 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TC2NQ8N9U0 490 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 C1orf162Q8NEQ5 155 aaPredicted RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 OR6C4Q8NGE1 309 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 OR52K1Q8NGK4 314 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PIGBQ92521 554 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 DPF2Q92785 391 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ATP6V0A1Q93050 837 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 DHX58Q96C10 678 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TUBGCP3Q96CW5 907 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 FAM89AQ96GI7 184 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TMEM41AQ96HV5 264 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TMEM237Q96Q45 408 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 CTAGE1Q96RT6 745 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 CRACR2AQ9BSW2 395 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 NACAP1Q9BZK3 213 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 BRD8Q9H0E9 1235 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 NSRP1Q9H0G5 558 aaKnown RBP4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ZCWPW1Q9H0M4 648 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SEMA4AQ9H3S1 761 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 GREM2Q9H772 168 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PREBQ9HCU5 417 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 CNNM1Q9NRU3 951 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 GJB4Q9NTQ9 266 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 ZNF446Q9NWS9 450 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 IL1RAPL1Q9NZN1 696 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 TEKT2Q9UIF3 430 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 MAN1B1Q9UKM7 699 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SSX2IPQ9Y2D8 614 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 SLC4A4Q9Y6R1 1079 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 BCORQ6W2J9 1755 aa4.22□□□□□ -1.73
PRPF38B-205ENST00000485810 PLCH1Q4KWH8 1693 aa4.21□□□□□ -1.73
PRPF38B-205ENST00000485810 RREB1Q92766 1687 aa4.21□□□□□ -1.73
PRPF38B-205ENST00000485810 MYH3P11055 1940 aa4.21□□□□□ -1.73
PRPF38B-205ENST00000485810 GAKO14976 1311 aa4.21□□□□□ -1.74
PRPF38B-205ENST00000485810 PDS5AQ29RF7 1337 aaKnown RBP4.21□□□□□ -1.74
PRPF38B-205ENST00000485810 XIRP1Q702N8 1843 aaKnown RBP4.21□□□□□ -1.74
PRPF38B-205ENST00000485810 BTBD18B2RXH4 712 aa4.21□□□□□ -1.74
PRPF38B-205ENST00000485810 B4E1Z4 1266 aa4.21□□□□□ -1.74
PRPF38B-205ENST00000485810 FAM227AF5H4B4 570 aa4.21□□□□□ -1.74
PRPF38B-205ENST00000485810 L7N2F9 121 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms