RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TMA16Q96EY4 203 aaKnown RBP18.44■□□□□ 0.54
CPNE1-224ENST00000483359 HAPLN3Q96S86 360 aa18.44■□□□□ 0.54
CPNE1-224ENST00000483359 TRPV5Q9NQA5 729 aa18.44■□□□□ 0.54
CPNE1-224ENST00000483359 SPECC1L-ADORA2AF8WAN1 911 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 FAM72CH0Y354 149 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 TBL1XO60907 577 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 MOCS3O95396 460 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 TAS2R40P59535 323 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 SLC25A11Q02978 314 aaKnown RBP18.43■□□□□ 0.54
CPNE1-224ENST00000483359 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-224ENST00000483359 MPPE1Q53F39 396 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 FAM72AQ5TYM5 149 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 FAM72DQ6L9T8 149 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 TXNDC11Q6PKC3 985 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 DAAM2Q86T65 1068 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 FAM72BQ86X60 149 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 IGSF8Q969P0 613 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 COL25A1Q9BXS0 654 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-224ENST00000483359 DHX35Q9H5Z1 703 aaKnown RBP18.43■□□□□ 0.54
CPNE1-224ENST00000483359 KLHL11Q9NVR0 708 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 OR12D3Q9UGF7 316 aa18.43■□□□□ 0.54
CPNE1-224ENST00000483359 TYW5A2RUC4 315 aaKnown RBP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 KRBA1A5PL33 1030 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 BTNL10A8MVZ5 291 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 SPOPO43791 374 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 CREB3O43889 395 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 COMTP21964 271 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 CTHP32929 405 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 MAN1A1P33908 653 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 HADHBP55084 474 aaKnown RBP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 MLLT6P55198 1093 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 SCAPQ12770 1279 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 MTA1Q13330 715 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 GAB4Q2WGN9 574 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 ERMARDQ5T6L9 678 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 HJURPQ8NCD3 748 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 TSGA10Q9BZW7 698 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 TMEM51Q9NW97 253 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 LCMT1Q9UIC8 334 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 CLEC4EQ9ULY5 219 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 E9PAM4 449 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 GFRA2O00451 464 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 TRIM24O15164 1050 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 KRT86O43790 486 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 HOXD9P28356 352 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 SLC6A11P48066 632 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 PPP6R3Q5H9R7 873 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.42■□□□□ 0.54
CPNE1-224ENST00000483359 MPP6Q9NZW5 540 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 MARK1Q9P0L2 795 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 WNT16Q9UBV4 365 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 PYCARDQ9ULZ3 195 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 MIA3Q5JRA6 1907 aa18.42■□□□□ 0.54
CPNE1-224ENST00000483359 HOXC11O43248 304 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-224ENST00000483359 PENKP01210 267 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-224ENST00000483359 NUMBP49757 651 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 AIF1P55008 147 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 KDSRQ06136 332 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 HADHQ16836 314 aaKnown RBP18.41■□□□□ 0.54
CPNE1-224ENST00000483359 ATP13A4Q4VNC1 1196 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 RABGAP1LQ5R372 815 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 ZFYVE27Q5T4F4 411 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 CARNMT1Q8N4J0 409 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 NCAPGQ9BPX3 1015 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 DNAJC17Q9NVM6 304 aaKnown RBP18.41■□□□□ 0.54
CPNE1-224ENST00000483359 ALG6Q9Y672 507 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.542e-10■□□□□ 8.4
CPNE1-224ENST00000483359 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 LRIG2O94898 1065 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 RARAP10276 462 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 MESP2Q0VG99 397 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 PON2Q15165 354 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 RWDD4Q6NW29 188 aaKnown RBP18.41■□□□□ 0.54
CPNE1-224ENST00000483359 LRRC31Q6UY01 552 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 EDAQ92838 391 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 C1orf74Q96LT6 269 aa18.41■□□□□ 0.54
CPNE1-224ENST00000483359 KCTD15Q96SI1 283 aaPredicted RBP18.41■□□□□ 0.54
CPNE1-224ENST00000483359 GRID2IPA4D2P6 1211 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 TULP3O75386 442 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 PALMO75781 387 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 CNTN5O94779 1100 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 OPRD1P41143 372 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 SIGLEC14Q08ET2 396 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 ALFQ53S48 1182 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 C11orf63Q6NUN7 778 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 TFAP2DQ7Z6R9 452 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 RALGPS2Q86X27 583 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-224ENST00000483359 MFN1Q8IWA4 741 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 ZNF683Q8IZ20 524 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 WFDC5Q8TCV5 224 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 XPO6Q96QU8 1125 aaKnown RBP18.4■□□□□ 0.54
CPNE1-224ENST00000483359 OSBPL2Q9H1P3 480 aa18.4■□□□□ 0.54
CPNE1-224ENST00000483359 C8orf33Q9H7E9 229 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-224ENST00000483359 TRMT1Q9NXH9 659 aaKnown RBP18.4■□□□□ 0.54
CPNE1-224ENST00000483359 NDRG2Q9UN36 371 aaKnown RBP18.4■□□□□ 0.54
CPNE1-224ENST00000483359 KIAA1549LQ6ZVL6 1849 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 CACNG3O60359 315 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 SLC1A1P43005 524 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 CDH18Q13634 790 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 ETFBKMTQ8IXQ9 262 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms