RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 COG7P83436 770 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 MPP3Q13368 585 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 FSCN1Q16658 493 aaKnown RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 NBPF20Q3BBV1 942 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 C4orf50Q6ZRC1 276 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 AFAP1L2Q8N4X5 818 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 AZIN2Q96A70 460 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 CXCL16Q9H2A7 254 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 XPNPEP3Q9NQH7 507 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 SYBUQ9NX95 663 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 NDE1Q9NXR1 346 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 ANGPTL2Q9UKU9 493 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 C15orf41Q9Y2V0 281 aa9.39□□□□□ -0.91
CALD1-220ENST00000482470 MYH9P35579 1960 aaKnown RBP9.39□□□□□ -0.91
CALD1-220ENST00000482470 PDE5AO76074 875 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 LMNAP02545 664 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 LTFP02788 710 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 ALADP13716 330 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 CALB2P22676 271 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 BRCC3P46736 316 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 SLC1A6P48664 564 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 NR2C2P49116 596 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 POLE2P56282 527 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 UBAP2LQ14157 1087 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 HABP4Q5JVS0 413 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 SYPL2Q5VXT5 272 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 ZDHHC17Q8IUH5 632 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 RNF148Q8N7C7 305 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
CALD1-220ENST00000482470 PPWD1Q96BP3 646 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 HSFY1Q96LI6 401 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 BTBD10Q9BSF8 475 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 SP110Q9HB58 689 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 RRAGCQ9HB90 399 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 DTLQ9NZJ0 730 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 ATXN2Q99700 1313 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 A0A096LPK6 155 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 VAPBO95292 243 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 LILRA4P59901 499 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 MRPS5P82675 430 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 CCL14Q16627 93 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 VPS39Q96JC1 886 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 ADA2Q9NZK5 511 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 SCOCQ9UIL1 159 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 SLC12A4Q9UP95 1085 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 CNTN6Q9UQ52 1028 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 CDY2AQ9Y6F7 541 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 GOLGA4Q13439 2230 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 UBA6A0AVT1 1052 aaPredicted RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 MYBPHLA2RUH7 354 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 TRPA1O75762 1119 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 TCEA3O75764 348 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 UBTFL6P0CB48 400 aaPredicted RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 PREPLQ4J6C6 727 aaPredicted RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 CERCAMQ5T4B2 595 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 CAPRIN2Q6IMN6 1127 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 ISLR2Q6UXK2 745 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 C4orf22Q6V702 233 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 MYLK4Q86YV6 388 aaPredicted RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 LRRC52Q8N7C0 313 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 BANPQ8N9N5 519 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 BRI3BPQ8WY22 251 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 BHMTQ93088 406 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 CLPTM1LQ96KA5 538 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 RBM22Q9NW64 420 aaKnown RBP eCLIP9.38□□□□□ -0.914e-7■■■■□ 26.5
CALD1-220ENST00000482470 ST3GAL5Q9UNP4 418 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 RUVBL2Q9Y230 463 aaKnown RBP9.38□□□□□ -0.91
CALD1-220ENST00000482470 CITO14578 2027 aa9.38□□□□□ -0.91
CALD1-220ENST00000482470 ZBTB42B2RXF5 422 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 C2CD2LO14523 706 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 TRDMT1O14717 391 aaKnown RBP9.37□□□□□ -0.91
CALD1-220ENST00000482470 DCXO43602 365 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 KRT36O76013 467 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 NFKB1P19838 968 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 GP5P40197 560 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 AP2B1P63010 937 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 SLC25A3Q00325 362 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 OCRLQ01968 901 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 FSCBQ5H9T9 825 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 OLFML1Q6UWY5 402 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 LAYNQ6UX15 382 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 HFE2Q6ZVN8 426 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 ACAD11Q709F0 780 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 DCAKDQ8WVC6 231 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
CALD1-220ENST00000482470 FICDQ9BVA6 458 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 RHOBTB2Q9BYZ6 727 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 CCDC134Q9H6E4 229 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 PTPRHQ9HD43 1115 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 SARS2Q9NP81 518 aaKnown RBP9.37□□□□□ -0.91
CALD1-220ENST00000482470 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 SPATS2LQ9NUQ6 558 aaKnown RBP9.37□□□□□ -0.91
CALD1-220ENST00000482470 ZNF358Q9NW07 568 aa9.37□□□□□ -0.91
CALD1-220ENST00000482470 IGKV6-21A0A0C4DH24 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms