RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 UPK3BL2E5RIL1 263 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 GFRA2O00451 464 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 IKBKBO14920 756 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 DDX3YO15523 660 aaKnown RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TGFB1I1O43294 461 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 COCHO43405 550 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 OPHN1O60890 802 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CYBBP04839 570 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CFIP05156 583 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CTSBP07858 339 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 FAM200BP0CF97 657 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 KRT13P13646 458 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 HOXB2P14652 356 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 RPL13P26373 211 aaKnown RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 SLC5A3P53794 718 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 RPL6Q02878 288 aaKnown RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 KDSRQ06136 332 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 STARD3Q14849 445 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 WDR45BQ5MNZ6 344 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 C10orf76Q5T2E6 689 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 FAM173BQ6P4H8 233 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 PDZD3Q86UT5 571 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 HSCBQ8IWL3 235 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 ARHGAP18Q8N392 663 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 GALNT11Q8NCW6 608 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 KLHDC7BQ96G42 594 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 SMOC1Q9H4F8 434 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CYP3A43Q9HB55 503 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 PNPLA8Q9NP80 782 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 SLC39A2Q9NP94 309 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CHORDC1Q9UHD1 332 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 PTPRJQ12913 1337 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 A0A087X0B3 334 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 PDXKO00764 312 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 MAPK13O15264 365 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 HCRTO43612 131 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 STX10O60499 249 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TLR5O60602 858 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TULP3O75386 442 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CELA2BP08218 269 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CHKAP35790 457 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 PIK3CAP42336 1068 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 SLC6A11P48066 632 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 ENPEPQ07075 957 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TCEAL6Q6IPX3 200 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 KLHDC10Q6PID8 442 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 UNQ6494/PRO21346Q6UXR6 183 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 HTR3DQ70Z44 454 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TRIM42Q8IWZ5 723 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CHPFQ8IZ52 775 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CRYBG2Q8N1P7 616 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TERB1Q8NA31 727 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 PARD3BQ8TEW8 1205 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TMEM174Q8WUU8 243 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 EZH1Q92800 747 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 TCEAL3Q969E4 200 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 FAXDC2Q96IV6 333 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 BBS2Q9BXC9 721 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 FGFBP2Q9BYJ0 223 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 ZDHHC5Q9C0B5 715 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 KRT82Q9NSB4 513 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 RXFP3Q9NSD7 469 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 DNAJC17Q9NVM6 304 aaKnown RBP7.64□□□□□ -1.19
BRCA1-214ENST00000477152 IL37Q9NZH6 218 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 CACNA1BQ00975 2339 aa7.64□□□□□ -1.19
BRCA1-214ENST00000477152 DMXL1Q9Y485 3027 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 FAM92AA1XBS5 289 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 SGK1O00141 431 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 CLDN5O00501 218 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 SERPINF2P08697 491 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 HOXB4P17483 251 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-214ENST00000477152 ENGP17813 658 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 ARNTP27540 789 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 OXTRP30559 389 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 KIR2DL1P43626 348 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-214ENST00000477152 AFMP43652 599 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 IRX4P78413 519 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 COG7P83436 770 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 SLC14A1Q13336 389 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 INTS8Q75QN2 995 aaKnown RBP7.63□□□□□ -1.19
BRCA1-214ENST00000477152 ACOT1Q86TX2 421 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 TMEFF1Q8IYR6 380 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 NAT16Q8N8M0 369 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 ENGASEQ8NFI3 743 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 HPS3Q969F9 1004 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 GAL3ST3Q96A11 431 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 ZNF775Q96BV0 537 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-214ENST00000477152 NT5C1AQ9BXI3 368 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 DPEP3Q9H4B8 488 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 CSNK1G1Q9HCP0 422 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 STRIP2Q9ULQ0 834 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 SCML2Q9UQR0 700 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 NEUROG3Q9Y4Z2 214 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 MYOFQ9NZM1 2061 aa7.63□□□□□ -1.19
BRCA1-214ENST00000477152 SDK1Q7Z5N4 2213 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 A0A1W2PQD8 194 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 NEDD8-MDP1E9PL57 170 aa7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SYNCRIPO60506 623 aaKnown RBP7.62□□□□□ -1.19
BRCA1-214ENST00000477152 SLFN14P0C7P3 912 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms