RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ACTN2P35609 894 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 ZNF445P59923 1031 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 KCNJ12Q14500 433 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 TBC1D25Q3MII6 688 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 ZNF394Q53GI3 561 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 PIGZQ86VD9 579 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 WFDC5Q8TCV5 224 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 NDRG1Q92597 394 aaKnown RBP17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 HEXIM2Q96MH2 286 aaKnown RBP17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 IMPG2Q9BZV3 1241 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 NEUROG2Q9H2A3 272 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 MAGEF1Q9HAY2 307 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 SCML1Q9UN30 329 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 HBS1LQ9Y450 684 aaKnown RBP17.14■□□□□ 0.33
APOBEC3F-203ENST00000476513 TENM4Q6N022 2769 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 A0A1W2PP55 124 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 C10orf142B7Z368 130 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 PPP6R2O75170 966 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 NR3C1P04150 777 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 GLDCP23378 1020 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 ARRB1P49407 418 aaPredicted RBP17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 SGSHP51688 502 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 BNIP3Q12983 259 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 ILKQ13418 452 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 CUL4BQ13620 913 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 ADGRF1Q5T601 910 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 SFMBT2Q5VUG0 894 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 PM20D1Q6GTS8 502 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 BHLHA9Q7RTU4 235 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 CACTIN-AS1Q8N1I8 211 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 OR2T34Q8NGX1 318 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 TAS1R2Q8TE23 839 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 RFFLQ8WZ73 363 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 MYO19Q96H55 970 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 ULBP1Q9BZM6 244 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 KCTD10Q9H3F6 313 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 PLXNA2O75051 1894 aa17.13■□□□□ 0.33
APOBEC3F-203ENST00000476513 LRRC72A6NJI9 287 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 ERVH48-1M5A8F1 160 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 MID1O15344 667 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 SIN3BO75182 1162 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 ZBED1O96006 694 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 CKMT2P17540 419 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 AFMP43652 599 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 CCR5P51681 352 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 TKTL1P51854 596 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 NXPH1P58417 271 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 STK4Q13043 487 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 CST6Q15828 149 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 TAF1BQ53T94 588 aaPredicted RBP17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 KANSL1Q7Z3B3 1105 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 DCBLD1Q8N8Z6 715 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 KIAA0895Q8NCT3 520 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 DNAI2Q9GZS0 605 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 OLA1Q9NTK5 396 aaKnown RBP17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 ADAMTS1Q9UHI8 967 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 SFMBT1Q9UHJ3 866 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 CLCA2Q9UQC9 943 aa17.12■□□□□ 0.33
APOBEC3F-203ENST00000476513 TLR4O00206 839 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 RNASEH1O60930 286 aaKnown RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 RNASEH2AO75792 299 aaKnown RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 LATS1O95835 1130 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 RXRGP48443 463 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 GCLMP48507 274 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 VAMP7P51809 220 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 INSM1Q01101 510 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 SFSWAPQ12872 951 aaKnown RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 HNRNPA1L2Q32P51 320 aaKnown RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 TTC17Q96AE7 1141 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
APOBEC3F-203ENST00000476513 MYO18BQ8IUG5 2567 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 TULP2O00295 520 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 PDXKO00764 312 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 MSI1O43347 362 aaKnown RBP17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 KLRC4O43908 158 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 CUTAO60888 179 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 TBL1XO60907 577 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 ST8SIA6P61647 398 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 PPP3CAQ08209 521 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 MPP7Q5T2T1 576 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 C9orf64Q5T6V5 341 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 ARHGAP17Q68EM7 881 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 RFWD3Q6PCD5 774 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 SPATS2Q86XZ4 545 aaKnown RBP17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 MMAAQ8IVH4 418 aaKnown RBP17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 GRAMD1CQ8IYS0 662 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 ANKRD52Q8NB46 1076 aa17.1■□□□□ 0.33
APOBEC3F-203ENST00000476513 SLC4A11Q8NBS3 891 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms