RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PRKD1Q15139 912 aaPredicted RBP17.13■□□□□ 0.33
TVP23B-202ENST00000476139 C4orf22Q6V702 233 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 MAGEC3Q8TD91 643 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 DEPDC1BQ8WUY9 529 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 EIF4E1BA6NMX2 242 aaKnown RBP17.13■□□□□ 0.33
TVP23B-202ENST00000476139 KRT37O76014 449 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 ASGR1P07306 291 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 DHRS4L1P0CG22 281 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 BGNP21810 368 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 BDNFP23560 247 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 FLT3LGP49771 235 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 RIPK1Q13546 671 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 PSTKQ8IV42 348 aaKnown RBP17.13■□□□□ 0.33
TVP23B-202ENST00000476139 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 TMEM209Q96SK2 561 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 CXorf56Q9H5V9 222 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 PCDHA11Q9Y5I1 949 aa17.13■□□□□ 0.33
TVP23B-202ENST00000476139 BPTFQ12830 3046 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 HACD1B0YJ81 288 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 COPEO14579 308 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 DCLK1O15075 740 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 TOMM70O94826 608 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 CCNB1P14635 433 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 MGAT1P26572 445 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 CAP1Q01518 475 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 MGAT3Q09327 533 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 RAB41Q5JT25 222 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 CES3Q6UWW8 571 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 BHLHA9Q7RTU4 235 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 PID1Q7Z2X4 250 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 TMEM86AQ8N2M4 240 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 MYCBPQ99417 103 aaPredicted RBP17.12■□□□□ 0.33
TVP23B-202ENST00000476139 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 TMLHEQ9NVH6 421 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 MOCS1Q9NZB8 636 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 INPP5FQ9Y2H2 1132 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 ITGB1P05556 798 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 EPHB2P29323 1055 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 ALDH3A1P30838 453 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 BZW1Q7L1Q6 419 aaKnown RBP17.12■□□□□ 0.33
TVP23B-202ENST00000476139 NPWQ8N729 165 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 ARNTL2Q8WYA1 636 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 PRR11Q96HE9 360 aaPredicted RBP17.12■□□□□ 0.33
TVP23B-202ENST00000476139 XAB2Q9HCS7 855 aaKnown RBP17.12■□□□□ 0.33
TVP23B-202ENST00000476139 CNGB3Q9NQW8 809 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 FBXW11Q9UKB1 542 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 GIT1Q9Y2X7 761 aa17.12■□□□□ 0.33
TVP23B-202ENST00000476139 FAM159BA6NKW6 160 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 GPR182O15218 404 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 USP12O75317 370 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 LTFP02788 710 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 ELF1P32519 619 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 GLUD2P49448 558 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 PDK1Q15118 436 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 KCNA10Q16322 511 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 LRRTM3Q86VH5 581 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 TXLNGQ9NUQ3 528 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 KANSL3Q9P2N6 904 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 NKX1-2Q9UD57 310 aaPredicted RBP17.11■□□□□ 0.33
TVP23B-202ENST00000476139 ZNF180Q9UJW8 692 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 CDH9Q9ULB4 789 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
TVP23B-202ENST00000476139 H0Y3Z8 333 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 HACE1Q8IYU2 909 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 MYLPFQ96A32 169 aa17.11■□□□□ 0.33
TVP23B-202ENST00000476139 SDR42E2A6NKP2 422 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 KPNA6O60684 536 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 FAM163BP0C2L3 166 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ALADP13716 330 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 YY1P25490 414 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SERPINB4P48594 390 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 PAFAH1B3Q15102 231 aaKnown RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 LONP2Q86WA8 852 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ARMC2Q8NEN0 867 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SCAMP5Q8TAC9 235 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 PGBD4Q96DM1 585 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 TSSK1BQ9BXA7 367 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ZFP69BQ9UJL9 534 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 FAM155AB1AL88 458 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 OPHN1O60890 802 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 FBXO21O94952 628 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SLC10A3P09131 477 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 FDFT1P37268 417 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SARNPP82979 210 aaKnown RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 CD300LGQ6UXG3 332 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SLC7A6OSQ96CW6 309 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 SMARCD1Q96GM5 515 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ADAM2Q99965 735 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 TBC1D10AQ9BXI6 508 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 IQCGQ9H095 443 aaKnown RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 TKTL2Q9H0I9 626 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 WDCPQ9H6R7 721 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 FBXO6Q9NRD1 293 aaPredicted RBP17.1■□□□□ 0.33
TVP23B-202ENST00000476139 PCMTD2Q9NV79 361 aa17.1■□□□□ 0.33
TVP23B-202ENST00000476139 PLLPQ9Y342 182 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms