RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 VPS36Q86VN1 386 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 TMEM25Q86YD3 366 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DENND1CQ8IV53 801 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 LRRC8AQ8IWT6 810 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 FAM217AQ8IXS0 508 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CCDC170Q8IYT3 715 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 KIAA1958Q8N8K9 716 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 MSANTD4Q8NCY6 345 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 ACRBPQ8NEB7 543 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 TTC16Q8NEE8 873 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 RNF139Q8WU17 664 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DEPDC1BQ8WUY9 529 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 E2F7Q96AV8 911 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 BTBD6Q96KE9 485 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 EIF3CQ99613 913 aaKnown RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 PRMT1Q99873 361 aaKnown RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DESI2Q9BSY9 194 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 NACA2Q9H009 215 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 KCNF1Q9H3M0 494 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 EBF3Q9H4W6 596 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 OSGEPQ9NPF4 335 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 RXFP3Q9NSD7 469 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DDIT4Q9NX09 232 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 GTSE1Q9NYZ3 720 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 MYO1AQ9UBC5 1043 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 STOML2Q9UJZ1 356 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 RAB23Q9ULC3 237 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CLEC4EQ9ULY5 219 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 WASF3Q9UPY6 502 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 TLR6Q9Y2C9 796 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 SNX10Q9Y5X0 201 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DUSP10Q9Y6W6 482 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 KIAA1549LQ6ZVL6 1849 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DSPP15924 2871 aaKnown RBP7.25□□□□□ -1.25
LIMD1-204ENST00000474665 SYNJ2BP-COX16A0A087WUM0 186 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ANTXRLA6NF34 631 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TRDMT1O14717 391 aaKnown RBP7.25□□□□□ -1.25
LIMD1-204ENST00000474665 CAPN9O14815 690 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 GIPC1O14908 333 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 CCP110O43303 1012 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 LRP3O75074 770 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 H2AFZP0C0S5 128 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TMEM253P0C7T8 217 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 CHRM1P11229 460 aaPredicted RBP7.25□□□□□ -1.25
LIMD1-204ENST00000474665 GPD1P21695 349 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 GGCXP38435 758 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 SOX9P48436 509 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 SULT1E1P49888 294 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 IRAK1P51617 712 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 GSDMDP57764 484 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 NME3Q13232 169 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PPP2R5DQ14738 602 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TCEAL1Q15170 157 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 DHCR24Q15392 516 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ARHGAP29Q52LW3 1261 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 LY6G5CQ5SRR4 150 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PIK3R6Q5UE93 754 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 RNF43Q68DV7 783 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TXNRD3NBQ6F5E7 133 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PSAPL1Q6NUJ1 521 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PPP1R2P3Q6NXS1 205 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 RFWD3Q6PCD5 774 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TXNDC11Q6PKC3 985 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 H2AFVQ71UI9 128 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 C14orf80Q86SX3 495 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TADA2BQ86TJ2 420 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 C12orf40Q86WS4 652 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 FAM131BQ86XD5 332 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
LIMD1-204ENST00000474665 SFTPA1Q8IWL2 248 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF683Q8IZ20 524 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF687Q8N1G0 1237 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 CCDC185Q8N715 623 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TTC8Q8TAM2 541 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 FNIP1Q8TF40 1166 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 FAM172AQ8WUF8 416 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 GOLGA1Q92805 767 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 AZIN2Q96A70 460 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PLD4Q96BZ4 506 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 SERPINB11Q96P15 392 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PEBP4Q96S96 227 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 CNPY3Q9BT09 278 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TRIM62Q9BVG3 475 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 SELENOOQ9BVL4 669 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 NUP85Q9BW27 656 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 DEF6Q9H4E7 631 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 BRD9Q9H8M2 597 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ECT2Q9H8V3 914 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 FAM204AQ9H8W3 233 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 FBRSL1Q9HCM7 1045 aaKnown RBP7.25□□□□□ -1.25
LIMD1-204ENST00000474665 TRPV5Q9NQA5 729 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PARVAQ9NVD7 372 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 DUS2Q9NX74 493 aaKnown RBP7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ARHGEF38Q9NXL2 777 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 COX16Q9P0S2 106 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 PCDHA13Q9Y5I0 950 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 BPTFQ12830 3046 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 ADAMTS20P59510 1910 aa7.25□□□□□ -1.25
LIMD1-204ENST00000474665 FAM72CH0Y354 149 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms