RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ZNF512Q96ME7 567 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 UROC1Q96N76 676 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 BBC3Q96PG8 261 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 HHIPQ96QV1 700 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM209Q96SK2 561 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 LACRTQ9GZZ8 138 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CRISPLD1Q9H336 500 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CYP3A43Q9HB55 503 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 TAS2R14Q9NYV8 317 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 NAGPAQ9UK23 515 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 GUCA1BQ9UMX6 200 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 CNTN6Q9UQ52 1028 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 MSRB2Q9Y3D2 182 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-205ENST00000472928 SNX9Q9Y5X1 595 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 PTPN13Q12923 2485 aa6.7□□□□□ -1.34
HDAC1-205ENST00000472928 KIF26AQ9ULI4 1882 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-205ENST00000472928 A0A1W2PNR3 127 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 OTOL1A6NHN0 477 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-205ENST00000472928 A6NHS1 94 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 PATE3B3GLJ2 98 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 H7C4K7 107 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 PIRO00625 290 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CILPO75339 1184 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 EGFP01133 1207 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 PAEPP09466 180 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 H2AFZP0C0S5 128 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CD19P15391 556 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 ABCB4P21439 1286 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 NDST1P52848 882 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CDH8P55286 799 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 GNG11P61952 73 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 INCA1Q0VD86 236 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 KIF5AQ12840 1032 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 ELF2Q15723 593 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CLEC16AQ2KHT3 1053 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CTXN3Q4LDR2 81 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 C10orf76Q5T2E6 689 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 NAA35Q5VZE5 725 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 NAIF1Q69YI7 327 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-205ENST00000472928 C19orf48Q6RUI8 117 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 SYT10Q6XYQ8 523 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 TRIM72Q6ZMU5 477 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 H2AFVQ71UI9 128 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 PIP4P1Q86T03 277 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF677Q86XU0 584 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 ADGRF2Q8IZF7 708 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 ELMOD1Q8N336 334 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CAMKK1Q8N5S9 505 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 SLC30A5Q8TAD4 765 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 CTNNBL1Q8WYA6 563 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-205ENST00000472928 FAXDC2Q96IV6 333 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 TWNKQ96RR1 684 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 ELOVL4Q9GZR5 314 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 FBRSL1Q9HCM7 1045 aaKnown RBP6.69□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM9BQ9NQ34 198 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 HPS4Q9NQG7 708 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 OBP2AQ9NY56 170 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 MAFFQ9ULX9 164 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 L1RE1Q9UN81 338 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 SLC8A2Q9UPR5 921 aa6.69□□□□□ -1.34
HDAC1-205ENST00000472928 THADAQ6YHU6 1953 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 CABIN1Q9Y6J0 2220 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SPAARA0A1B0GVQ0 90 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 FAM221BA6H8Z2 402 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 KPNA7A9QM74 516 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 M0QYV0 167 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 TRDMT1O14717 391 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 PJA2O43164 708 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 HUS1O60921 280 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ATG13O75143 517 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 RHOBTB1O94844 696 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 LSM8O95777 96 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM253P0C7T8 217 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 BCKDHBP21953 392 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 GRNP28799 593 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 NSFP46459 744 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 RAD23BP54727 409 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 GALCP54803 685 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ETF1P62495 437 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 NOMO3P69849 1222 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 IRX4P78413 519 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SLC20A2Q08357 652 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 TRIP4Q15650 581 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SOWAHAQ2M3V2 549 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 UAP1L1Q3KQV9 507 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ITPRIPL2Q3MIP1 535 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF569Q5MCW4 686 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 PMS2CLQ68D20 193 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF280DQ6N043 979 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 DPH6Q7L8W6 267 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SLC35F6Q8N357 371 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 PDCL2Q8N4E4 241 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 TTC39CQ8N584 583 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 TOP6BLQ8N6T0 577 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SLC4A11Q8NBS3 891 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 C1orf131Q8NDD1 294 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms