RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 OSBPL6Q9BZF3 934 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 TUT1Q9H6E5 874 aaKnown RBP10.4□□□□□ -0.74
APTX-216ENST00000472896 VAT1LQ9HCJ6 419 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 AVENQ9NQS1 362 aaPredicted RBP10.4□□□□□ -0.74
APTX-216ENST00000472896 CNTN3Q9P232 1028 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 SEL1LQ9UBV2 794 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 DRG1Q9Y295 367 aaKnown RBP10.4□□□□□ -0.74
APTX-216ENST00000472896 CEPT1Q9Y6K0 416 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 SQORQ9Y6N5 450 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 PTPRZ1P23471 2315 aaPredicted RBP10.4□□□□□ -0.74
APTX-216ENST00000472896 KMT2EQ8IZD2 1858 aa10.4□□□□□ -0.74
APTX-216ENST00000472896 CFAP54Q96N23 3096 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 PMM2O15305 246 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
APTX-216ENST00000472896 CFBP00751 764 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 MT-ND3P03897 115 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 FAM58BPP0C7Q3 252 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 CDH2P19022 906 aaPredicted RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 ACAT1P24752 427 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 PEX2P28328 305 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 PMLP29590 882 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 HDAC4P56524 1084 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 CCNIQ14094 377 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 GPATCH4Q5T3I0 446 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 ACAD10Q6JQN1 1059 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 TTC7BQ86TV6 843 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 VSIG10LQ86VR7 867 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SCAIQ8N9R8 606 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 DEPTORQ8TB45 409 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SPPL3Q8TCT6 385 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SLC26A7Q8TE54 656 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ATOH1Q92858 354 aaPredicted RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 APBB2Q92870 758 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SLC5A5Q92911 643 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ZNF689Q96CS4 500 aaPredicted RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 HSPBAP1Q96EW2 488 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 JMJD4Q9H9V9 463 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 UBE2TQ9NPD8 197 aaPredicted RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 ARMCX1Q9P291 453 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 NOCTQ9UK39 431 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 ITGA11Q9UKX5 1188 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 MRPL11Q9Y3B7 192 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 H0Y858 1186 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 MAGEB3O15480 346 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 GLP2RO95838 553 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 LGALS2P05162 132 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 EIF2S1P05198 315 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 ITGB1P05556 798 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 CPOXP36551 454 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 HALP42357 657 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ALDH1A3P47895 512 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 NDUFV1P49821 464 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 HSD17B4P51659 736 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ADAM17P78536 824 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 BFSP1Q12934 665 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 TLR1Q15399 786 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 CLPPQ16740 277 aaPredicted RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 OLFML1Q6UWY5 402 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 RNF111Q6ZNA4 994 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ASCL5Q7RTU5 278 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 EXOC8Q8IYI6 725 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 FAM71AQ8IYT1 594 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SMRP1Q8NCR6 262 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 GSTCDQ8NEC7 633 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ACTRT2Q8TDY3 377 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 PYDC1Q8WXC3 89 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 GJA10Q969M2 543 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SGF29Q96ES7 293 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 DCUN1D1Q96GG9 259 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 BTBD6Q96KE9 485 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 MRPL1Q9BYD6 325 aaKnown RBP10.39□□□□□ -0.75
APTX-216ENST00000472896 KLC2Q9H0B6 622 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 FAM96AQ9H5X1 160 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 NRDE2Q9H7Z3 1164 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 TLR9Q9NR96 1032 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 TBC1D23Q9NUY8 699 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 UBAP1Q9NZ09 502 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 SLC17A7Q9P2U7 560 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 ZNF180Q9UJW8 692 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 PSMD13Q9UNM6 376 aa10.39□□□□□ -0.75
APTX-216ENST00000472896 PLXNA3P51805 1871 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 FAM237BA0A1B0GVD1 139 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 ARHGAP42A6NI28 874 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 BOLA2-SMG1P6H3BVE0 249 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 ITM2AO43736 263 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 FAM189A1O60320 539 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 DNAJA2O60884 412 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 PPP1R11O60927 126 aaPredicted RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 CLASP2O75122 1294 aaKnown RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 PDGFBP01127 241 aaPredicted RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 BGNP21810 368 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 S100A1P23297 94 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms