RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 SLC39A6Q13433 755 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 FHL3Q13643 280 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 CSHL1Q14406 222 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 GRM4Q14833 912 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 TEDDM1Q5T9Z0 273 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 DEPDC1Q5TB30 811 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 DTX2Q86UW9 622 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 SIMC1Q8NDZ2 872 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 CPEB3Q8NE35 698 aaKnown RBP6.36□□□□□ -1.39
CKS1B-204ENST00000471245 ATRIPQ8WXE1 791 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 DVL3Q92997 716 aaPredicted RBP6.36□□□□□ -1.39
CKS1B-204ENST00000471245 ZBTB45Q96K62 511 aaPredicted RBP6.36□□□□□ -1.39
CKS1B-204ENST00000471245 CDK5RAP1Q96SZ6 601 aaKnown RBP6.36□□□□□ -1.39
CKS1B-204ENST00000471245 C17orf80Q9BSJ5 609 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 TTPALQ9BTX7 342 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 ACTRT3Q9BYD9 372 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 TPSD1Q9BZJ3 242 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 WASH6PQ9NQA3 447 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 FSCN3Q9NQT6 498 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 DKK2Q9UBU2 259 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 DAPP1Q9UN19 280 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 CRYL1Q9Y2S2 319 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 MAP3K2Q9Y2U5 619 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 COL4A5P29400 1685 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 FAM90A18PA6NE21 464 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 FAM90A16PA6NEW6 464 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 FAM90A9PA6NNJ1 464 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 ZAR1LA6NP61 321 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 EFCAB8A8MWE9 144 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 FAM90A5PA8MXJ8 464 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 B8ZZF3 427 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 J3KRW8 73 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 PRRG2O14669 202 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
CKS1B-204ENST00000471245 TAF5LO75529 589 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 PRKCBP05771 671 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 FAM90A15PP0C7V4 464 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 FAM90A14PP0C7W9 464 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 CD19P15391 556 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 PPP3CBP16298 524 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 AKT1P31749 480 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 MAP2K2P36507 400 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 EIF5P55010 431 aaKnown RBP6.35□□□□□ -1.39
CKS1B-204ENST00000471245 TLE2Q04725 743 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 ITIH3Q06033 890 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 ACOX1Q15067 660 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 SLC4A8Q2Y0W8 1093 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 CST9Q5W186 159 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 FSTL5Q8N475 847 aaPredicted RBP6.35□□□□□ -1.39
CKS1B-204ENST00000471245 PPHLN1Q8NEY8 458 aaKnown RBP6.35□□□□□ -1.39
CKS1B-204ENST00000471245 SLC30A5Q8TAD4 765 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 RILPL2Q969X0 211 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 RSPRY1Q96DX4 576 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 MYEOVQ96EZ4 313 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 MASTLQ96GX5 879 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 TRAPPC9Q96Q05 1148 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 ADAM2Q99965 735 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 DEF6Q9H4E7 631 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 ZNF703Q9H7S9 590 aaPredicted RBP6.35□□□□□ -1.39
CKS1B-204ENST00000471245 RIC8AQ9NPQ8 531 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 G6PC2Q9NQR9 355 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 NDUFAF4Q9P032 175 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 STEAP1Q9UHE8 339 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 SLC13A4Q9UKG4 626 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 DRG1Q9Y295 367 aaKnown RBP6.35□□□□□ -1.39
CKS1B-204ENST00000471245 SLC27A6Q9Y2P4 619 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 TMEM98Q9Y2Y6 226 aa6.35□□□□□ -1.39
CKS1B-204ENST00000471245 SNED1Q8TER0 1413 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 NCANO14594 1321 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 GXYLT2A0PJZ3 443 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 C1QTNF3-AMACRE9PGA6 284 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 PPM1DO15297 605 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 CA12O43570 354 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 TNNT2P45379 298 aaPredicted RBP6.34□□□□□ -1.39
CKS1B-204ENST00000471245 AARSP49588 968 aaKnown RBP eCLIP6.34□□□□□ -1.39
CKS1B-204ENST00000471245 SOX10P56693 466 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 DDX10Q13206 875 aaKnown RBP6.34□□□□□ -1.39
CKS1B-204ENST00000471245 CUL4BQ13620 913 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 BTBD16Q32M84 506 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 TRABD2AQ86V40 505 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 TMTC1Q8IUR5 882 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 CPOQ8IVL8 374 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 GPC2Q8N158 579 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 SYNE4Q8N205 404 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 CNBD1Q8NA66 436 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 B3GALNT2Q8NCR0 500 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 AFG1LQ8WV93 481 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 SOCS4Q8WXH5 440 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 ASB12Q8WXK4 309 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 CPT1BQ92523 772 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 GPR20Q99678 358 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 KLC2Q9H0B6 622 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 VPS16Q9H269 839 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 UNC45AQ9H3U1 944 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 ELAC1Q9H777 363 aaKnown RBP6.34□□□□□ -1.39
CKS1B-204ENST00000471245 RXFP3Q9NSD7 469 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 CNTN6Q9UQ52 1028 aa6.34□□□□□ -1.39
CKS1B-204ENST00000471245 POLR2AP24928 1970 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms