RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 MTMR11A4FU01 709 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 C2CD4BA6NLJ0 364 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 HHLA1C9JL84 531 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 C5orf67F2Z3F1 127 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 F8VP50 259 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 TULP2O00295 520 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 KCNK3O14649 394 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ENC1O14682 589 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 CAPN9O14815 690 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DAB1O75553 588 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ABLIM3O94929 683 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 F9P00740 461 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PROCP04070 461 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 HAPLN1P10915 354 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 LCP1P13796 627 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ATF2P15336 505 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PDGFRAP16234 1089 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 CYP2F1P24903 491 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 OR1D2P34982 312 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 CTNNA1P35221 906 aaKnown RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 RFC1P35251 1148 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PCK1P35558 622 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 MATKP42679 507 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ARPP19P56211 112 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 RWDD2BP57060 319 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DAOAP59103 153 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 RPL7AP62424 266 aaKnown RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 AMPD2Q01433 879 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ROR1Q01973 937 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 MTA1Q13330 715 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 GPM6BQ13491 265 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 RAB33AQ14088 237 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 VEPH1Q14D04 833 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PPP2R5EQ16537 467 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PTPROQ16827 1216 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 C2CD6Q53TS8 623 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 SEL1L2Q5TEA6 688 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PM20D1Q6GTS8 502 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 CC2D1AQ6P1N0 951 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PRSS55Q6UWB4 352 aaPredicted RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 STRADAQ7RTN6 431 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 SCN4BQ8IWT1 228 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 NUP93Q8N1F7 819 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 KLHL23Q8NBE8 558 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ZMIZ2Q8NF64 920 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 FAM149B1Q96BN6 582 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 TMEM209Q96SK2 561 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 OSBPL9Q96SU4 736 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 CDK5RAP1Q96SZ6 601 aaKnown RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 TBCBQ99426 244 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DDX23Q9BUQ8 820 aaKnown RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 ZBP1Q9H171 429 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 NSUN3Q9H649 340 aaKnown RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 POPDC2Q9HBU9 364 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 NGRNQ9NPE2 291 aaKnown RBP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 TMLHEQ9NVH6 421 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DZANK1Q9NVP4 752 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DPP7Q9UHL4 492 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 SCML2Q9UQR0 700 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 GVINP1Q7Z2Y8 2422 aa6.91□□□□□ -1.3
VAMP3-202ENST00000470357 DENND4CQ5VZ89 1909 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 WDR27A2RRH5 827 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CTAGE15A4D2H0 777 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TMEM221A6NGB7 291 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 M0R296 226 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PGRMC1O00264 195 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PRRG1O14668 218 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PRPSAP2O60256 369 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TBX10O75333 385 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 BEST1O76090 585 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ZRANB2O95218 330 aaKnown RBP eCLIP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SLU7O95391 586 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 LTFP02788 710 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 OR4Q2P0C623 313 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CTAGE8P0CG41 777 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CSH1P0DML2 217 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CSH2P0DML3 217 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 YWHAQP27348 245 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 GTF2F1P35269 517 aaKnown RBP eCLIP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SSR1P43307 286 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ALDH1A3P47895 512 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 PPP3CCP48454 512 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ZNF135P52742 658 aaPredicted RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SLC5A3P53794 718 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TERF1P54274 439 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 AIF1P55008 147 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ITIH3Q06033 890 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 ADCY1Q08828 1119 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 HYAL1Q12794 435 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 CAMK1Q14012 370 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 TAF12Q16514 161 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 SLC25A52Q3SY17 297 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 MGAT5BQ3V5L5 792 aa6.9□□□□□ -1.3
VAMP3-202ENST00000470357 BOLA3Q53S33 107 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms