RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MAT2BQ9NZL9 334 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CPNE7Q9UBL6 633 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 FBXO40Q9UH90 709 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 DPP7Q9UHL4 492 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 HERC5Q9UII4 1024 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 DBNLQ9UJU6 430 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 RNF112Q9ULX5 631 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 PCDHA12Q9UN75 941 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 AP3M1Q9Y2T2 418 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 NOSIPQ9Y314 301 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CAB39Q9Y376 341 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 XDHP47989 1333 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 WDR19Q8NEZ3 1342 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 C12orf71A8MTZ7 269 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 LINC01387J3KSC0 135 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 C2CD2LO14523 706 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TERTO14746 1132 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PSMA7O14818 248 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 AURKAO14965 403 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PJA2O43164 708 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 THAP12O43422 761 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ASNA1O43681 348 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 AP1G1O43747 822 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MAN1A2O60476 641 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RSL1D1O76021 490 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NADKO95544 446 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SLC5A1P13866 664 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 KRT15P19012 456 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SLC26A3P40879 764 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ALDH1A3P47895 512 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TNNI2P48788 182 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NDST2P52849 883 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 EIF3EP60228 445 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 STX1BP61266 288 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ASIC1P78348 528 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 LRRC63Q05C16 580 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 FCHO2Q0JRZ9 810 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GALNT1Q10472 559 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RRP1BQ14684 758 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 EFHC1Q5JVL4 640 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SLC10A5Q5PT55 438 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TCHHL1Q5QJ38 904 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF658Q5TYW1 1059 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 DUPD1Q68J44 220 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SCARA3Q6AZY7 606 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 METTL2BQ6P1Q9 378 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 BORAQ6PGQ7 559 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 APOA5Q6Q788 366 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 BTLAQ7Z6A9 289 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GPR180Q86V85 440 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 LURAP1LQ8IV03 231 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 UNC45BQ8IWX7 931 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SP8Q8IXZ3 490 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM22Q8IYM9 498 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 AHI1Q8N157 1196 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CMTR1Q8N1G2 835 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MARVELD2Q8N4S9 558 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CPA6Q8N4T0 437 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 BEND7Q8N7W2 519 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ASCC1Q8N9N2 400 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SPATA18Q8TC71 538 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ADAMTS16Q8TE57 1224 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 HTRA1Q92743 480 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RANBP9Q96S59 729 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CDX2Q99626 313 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TSG101Q99816 390 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM79Q9BSE2 394 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TUBB6Q9BUF5 446 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CDK19Q9BWU1 502 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 HOXD1Q9GZZ0 328 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 KLC2Q9H0B6 622 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GHITMQ9H3K2 345 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CDC42EP4Q9H3Q1 356 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TOR3AQ9H497 397 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 DNAJC18Q9H819 358 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ERVK-5Q9HDB9 667 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TUFT1Q9NNX1 390 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CD209Q9NNX6 404 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PAK6Q9NQU5 681 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ADPRHL2Q9NX46 363 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GDAP2Q9NXN4 497 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ANKMY1Q9P2S6 941 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CNOT7Q9UIV1 285 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ANAPC5Q9UJX4 755 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GRID1Q9ULK0 1009 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 VPS4AQ9UN37 437 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SRPRBQ9Y5M8 271 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CPQQ9Y646 472 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MYH15Q9Y2K3 1946 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MYH10P35580 1976 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TRAV6A0A075B6T7 132 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 A0A087X0T9 212 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GSTTP1A0A1W2PQM5 241 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 FCHO1O14526 889 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 POLR1CO15160 346 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PRKAB2O43741 272 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RNGTTO60942 597 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms