RNA–Protein interactions for RNA: ENST00000461520.5

USP54-208, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best)

Gene USP54, Length 1,212 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-208ENST00000461520 PTPN2P17706 415 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 CYP3A5P20815 502 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 LRPAP1P30533 357 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 ABCD1P33897 745 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 LONP1P36776 959 aaKnown RBP7.86□□□□□ -1.15
USP54-208ENST00000461520 MATR3P43243 847 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP54-208ENST00000461520 STARD6P59095 220 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 GPR85P60893 370 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 GPC5P78333 572 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 PFKPQ01813 784 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 KYAT1Q16773 422 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 TPGS2Q68CL5 300 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 ZNF280DQ6N043 979 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 HAUS6Q7Z4H7 955 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 TCEAL8Q8IYN2 117 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 APPL2Q8NEU8 664 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 KCNG4Q8TDN1 519 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 ZCCHC14Q8WYQ9 949 aaKnown RBP7.86□□□□□ -1.15
USP54-208ENST00000461520 C18orf25Q96B23 403 aaPredicted RBP7.86□□□□□ -1.15
USP54-208ENST00000461520 BICD1Q96G01 975 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 TSPAN18Q96SJ8 248 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 RPP25Q9BUL9 199 aaKnown RBP7.86□□□□□ -1.15
USP54-208ENST00000461520 SPATA9Q9BWV2 254 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 TBC1D17Q9HA65 648 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 HCFC1R1Q9NWW0 138 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 GDE1Q9NZC3 331 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 FBXL5Q9UKA1 691 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 MAFFQ9ULX9 164 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 MRPS23Q9Y3D9 190 aaKnown RBP7.86□□□□□ -1.15
USP54-208ENST00000461520 VWA8A3KMH1 1905 aa7.86□□□□□ -1.15
USP54-208ENST00000461520 M0QZQ0 153 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 PRRG1O14668 218 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 ZNF197O14709 1029 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 OGTO15294 1046 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 XPOTO43592 962 aaKnown RBP7.85□□□□□ -1.15
USP54-208ENST00000461520 ECI2O75521 394 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 PIGRP01833 764 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 CXCL8P10145 99 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 PAX3P23760 479 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 MARCKSP29966 332 aaPredicted RBP7.85□□□□□ -1.15
USP54-208ENST00000461520 LIG4P49917 911 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 ZNF131P52739 623 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 SF3A1Q15459 793 aaKnown RBP7.85□□□□□ -1.15
USP54-208ENST00000461520 ZBTB6Q15916 424 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 CTXN3Q4LDR2 81 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 GPBP1Q86WP2 473 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 ELMOD1Q8N336 334 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 MYCT1Q8N699 235 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 ZFYVE21Q9BQ24 234 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 REEP2Q9BRK0 252 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 HAPLN2Q9GZV7 340 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 TMEM168Q9H0V1 697 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 SEMA4AQ9H3S1 761 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 PARVGQ9HBI0 331 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 CYP4F11Q9HBI6 524 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 BLOC1S4Q9NUP1 217 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 DLGAP2Q9P1A6 1054 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 TUBGCP4Q9UGJ1 667 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 AFF4Q9UHB7 1163 aaKnown RBP7.85□□□□□ -1.15
USP54-208ENST00000461520 PFDN2Q9UHV9 154 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 TBX20Q9UMR3 447 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 UBQLN1Q9UMX0 589 aaKnown RBP7.85□□□□□ -1.15
USP54-208ENST00000461520 MSRB2Q9Y3D2 182 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 TRAF6Q9Y4K3 522 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 INSL5Q9Y5Q6 135 aa7.85□□□□□ -1.15
USP54-208ENST00000461520 DOCK8Q8NF50 2099 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 KANSL1LA0AUZ9 987 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 LACTBL1A8MY62 500 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 K7ENM7 598 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 HNRNPDLO14979 420 aaKnown RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 FAM189A1O60320 539 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 OAZ2O95190 189 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 SEC24AO95486 1093 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 KRT18P05783 430 aaKnown RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 ADRB2P07550 413 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 DCNP07585 359 aaKnown RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 PDCP20941 246 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 DDIT3P35638 169 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 TNFSF9P41273 254 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 AARSP49588 968 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP54-208ENST00000461520 ARPP19P56211 112 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 GTF2BQ00403 316 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 YWHAHQ04917 246 aaPredicted RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 ADCY1Q08828 1119 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 CUL4AQ13619 759 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 DHX8Q14562 1220 aaKnown RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 KARSQ15046 597 aaKnown RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 MLF2Q15773 248 aaPredicted RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 SLC5A9Q2M3M2 681 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 SLC44A4Q53GD3 710 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 SPECC1Q5M775 1068 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 CYP4A22Q5TCH4 519 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 TRMT10BQ6PF06 316 aaKnown RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 PDZD4Q76G19 769 aaPredicted RBP7.84□□□□□ -1.15
USP54-208ENST00000461520 LIMS2Q7Z4I7 341 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 C1orf210Q8IVY1 113 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 CD302Q8IX05 232 aa7.84□□□□□ -1.15
USP54-208ENST00000461520 KIAA2013Q8IYS2 634 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms