RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 BIKQ13323 160 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TSC22D1Q15714 1073 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 CTXN3Q4LDR2 81 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 C16orf86Q6ZW13 317 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TRIM51Q9BSJ1 452 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 OSGEPL1Q9H4B0 414 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TMEM216Q9P0N5 145 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 RAB21Q9UL25 225 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 PTPRUQ92729 1446 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 CBFA2T3O75081 653 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 LBPP18428 481 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SERPINB5P36952 375 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 PLEKHA7Q6IQ23 1121 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TTC27Q6P3X3 843 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ZFP28Q8NHY6 868 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 HAVCR1Q96D42 359 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 R3HDM2Q9Y2K5 976 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 H3BNX3 289 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ACSL4O60488 711 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 PCDH8O95206 1070 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ACAP1Q15027 740 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 FUT11Q495W5 492 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 REXO5Q96IC2 774 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 AIFM3Q96NN9 605 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 BBS4Q96RK4 519 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ACTR8Q9H981 624 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SQORQ9Y6N5 450 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 DEPDC5O75140 1603 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SLC9A3R1O14745 358 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 NUDT14O95848 222 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 UBTFL6P0CB48 400 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ZNF7P17097 686 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 COMTP21964 271 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 RPL9P32969 192 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 CCDC185Q8N715 623 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TRPV3Q8NET8 790 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ZSWIM1Q9BR11 485 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 DCLK3Q9C098 648 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 COMMD9Q9P000 198 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 MAP10Q9P2G4 905 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 DBR1Q9UK59 544 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 EFCAB10A6NFE3 127 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 AP3D1O14617 1153 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 CLPTM1O96005 669 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 AMHP03971 560 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 FAM228AQ86W67 206 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 AP3S1Q92572 193 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 RAB23Q9ULC3 237 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SNX13Q9Y5W8 968 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 A0A087X1B8 175 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 GRAP2O75791 330 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 BST2Q10589 180 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 KLHL17Q6TDP4 642 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 RPTNQ6XPR3 784 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 IZUMO1Q8IYV9 350 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 OR56A4Q8NGH8 313 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ZDHHC15Q96MV8 337 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 LRRC1Q9BTT6 524 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 VANGL2Q9ULK5 521 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 BTBD3Q9Y2F9 522 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 MROH7Q68CQ1 1323 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 UBDO15205 165 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 FSBPO95073 299 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 POU1F1P28069 291 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SMIM11AP58511 58 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 ACAD10Q6JQN1 1059 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 AGBL3Q8NEM8 1001 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 WDR24Q96S15 920 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TIMMDC1Q9NPL8 285 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 TNPO3Q9Y5L0 923 aaKnown RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 SGTAO43765 313 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 ITGB3P05106 788 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 FASP25445 335 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 MAPK8P45983 427 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 INTS11Q5TA45 600 aaKnown RBP9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 GRTP1Q5TC63 336 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 ZNF605Q86T29 641 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 KYQ8NBH2 561 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 TMC2Q8TDI7 906 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 PNKPQ96T60 521 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 C1orf50Q9BV19 199 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 ACOT9Q9Y305 439 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 MFHAS1Q9Y4C4 1052 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 ZBTB39O15060 712 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 ATG7O95352 703 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 CPSF4O95639 269 aaKnown RBP9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 SPIDRQ14159 915 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 TBCBQ99426 244 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 CPNE1Q99829 537 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 GSTK1Q9Y2Q3 226 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 IRGMA1A4Y4 181 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 URADA6NGE7 173 aa9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 NCF1BA6NI72 391 aaPredicted RBP9.07□□□□□ -0.96
SHROOM4-203ENST00000460112 NCF1CA8MVU1 366 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms