RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 PGPEP1Q9NXJ5 209 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 KLHL8Q9P2G9 620 aaPredicted RBP-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 SLC17A7Q9P2U7 560 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 ARPP21Q9UBL0 812 aaPredicted RBP-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 ASIC3Q9UHC3 531 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 FBXO5Q9UKT4 447 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 ITGA11Q9UKX5 1188 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 SORCS3Q9UPU3 1222 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 R3HDM2Q9Y2K5 976 aaKnown RBP-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 CHST2Q9Y4C5 530 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 PCDHB1Q9Y5F3 818 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 PCDHA8Q9Y5H6 950 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 RBM8AQ9Y5S9 174 aaKnown RBP-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 U3KQ87 197 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 PREX2Q70Z35 1606 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 TNIKQ9UKE5 1360 aa-1.85□□□□□ -2.71
SNORD54-201ENST00000459159 ZNF608Q9ULD9 1512 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PLXNA1Q9UIW2 1896 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SCN2AQ99250 2005 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PLXNB2O15031 1838 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 NCOA2Q15596 1464 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 A0A087X0T9 212 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 A0A0G2JN53 185 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 FAM236DA0A1B0GTK5 79 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ZNF879B4DU55 563 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 LOC730098B7Z3J9 87 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ERVH48-1M5A8F1 160 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 GRM8O00222 908 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 TEX28O15482 410 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CAPN5O15484 640 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PDPK1O15530 556 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SRGAP3O43295 1099 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 DLX3O60479 287 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 MSCO60682 206 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PHACTR2O75167 634 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SS18L1O75177 396 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CILPO75339 1184 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PRPF40AO75400 957 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PGLYRP1O75594 196 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SNUPNO95149 360 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ATG7O95352 703 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PRAMEF12O95522 483 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 AMBPP02760 352 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 KLKB1P03952 638 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SERPING1P05155 500 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 FCER2P06734 321 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CRHP06850 196 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ATXN1LP0C7T5 689 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 FAM236CP0DP71 79 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 RBP3P10745 1247 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 DBTP11182 482 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ENPP1P22413 925 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 MMP11P24347 488 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 TGFBR1P36897 503 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CFHR2P36980 270 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 AFMP43652 599 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CRKP46108 304 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 GLRBP48167 497 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ZNF41P51814 821 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 HNRNPFP52597 415 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 NKX2-5P52952 324 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 LIMK1P53667 647 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ERVK-21P61565 698 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ZBED6P86452 979 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 MAP2K1Q02750 393 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CYP4A11Q02928 519 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CFHR3Q02985 330 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 KLKP1Q107X0 134 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 EPS8Q12929 822 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SLC14A1Q13336 389 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 DHX34Q14147 1143 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 NR1D2Q14995 579 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ZRSR1Q15695 479 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 NAB2Q15742 525 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SMAD2Q15796 467 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 Q4G0T1 1027 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 AWAT1Q58HT5 328 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 OXLD1Q5BKU9 147 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ARSHQ5FYA8 562 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 VARS2Q5ST30 1063 aaKnown RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 C9orf64Q5T6V5 341 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 AGAP6Q5VW22 663 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ANKRD40Q6AI12 368 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 C22orf42Q6IC83 251 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 RAB12Q6IQ22 244 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 TMEM184AQ6ZMB5 413 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 DCDC5Q6ZRR9 648 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 EP400NLQ6ZTU2 488 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 PRRT2Q7Z6L0 340 aaPredicted RBP-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ZBTB33Q86T24 672 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 KIAA1328Q86T90 577 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SAPCD2Q86UD0 394 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CUZD1Q86UP6 607 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 VRK3Q8IV63 474 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 ZNF584Q8IVC4 421 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SPACA3Q8IXA5 215 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 FAM178BQ8IXR5 827 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 SAXO1Q8IYX7 474 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 CLDN19Q8N6F1 224 aa-1.86□□□□□ -2.71
SNORD54-201ENST00000459159 TEX45Q8NA69 505 aa-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms