RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 IQUBQ8NA54 791 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 GOLGA5Q8TBA6 731 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 WFDC5Q8TCV5 224 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 TSC1Q92574 1164 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 GOLGA1Q92805 767 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 TMA16Q96EY4 203 aaKnown RBP10.32□□□□□ -0.76
CLCN4-204ENST00000454850 C7orf25Q9BPX7 421 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 APOBEC3GQ9HC16 384 aaKnown RBP10.32□□□□□ -0.76
CLCN4-204ENST00000454850 CPNE5Q9HCH3 593 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 SFMBT1Q9UHJ3 866 aa10.32□□□□□ -0.76
CLCN4-204ENST00000454850 DOPEY2Q9Y3R5 2298 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 LRRC72A6NJI9 287 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 ERVH48-1M5A8F1 160 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 YKT6O15498 198 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 MSI1O43347 362 aaKnown RBP10.31□□□□□ -0.76
CLCN4-204ENST00000454850 TBL1XO60907 577 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 RNASEH1O60930 286 aaKnown RBP10.31□□□□□ -0.76
CLCN4-204ENST00000454850 SIN3BO75182 1162 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 SYT1P21579 422 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 AFMP43652 599 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 TKTL1P51854 596 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 CUL4BQ13620 913 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 KCNJ12Q14500 433 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
CLCN4-204ENST00000454850 CST6Q15828 149 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 ARHGAP40Q5TG30 622 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 CNNM4Q6P4Q7 775 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 RFWD3Q6PCD5 774 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 USP30Q70CQ3 517 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 PIGZQ86VD9 579 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 MMAAQ8IVH4 418 aaKnown RBP10.31□□□□□ -0.76
CLCN4-204ENST00000454850 GRAMD1CQ8IYS0 662 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 EDEM1Q92611 657 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 SERAC1Q96JX3 654 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 HEXIM2Q96MH2 286 aaKnown RBP10.31□□□□□ -0.76
CLCN4-204ENST00000454850 OMDQ99983 421 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 ULBP1Q9BZM6 244 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 NIF3L1Q9GZT8 377 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 RSPH9Q9H1X1 276 aaPredicted RBP10.31□□□□□ -0.76
CLCN4-204ENST00000454850 NEUROG2Q9H2A3 272 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 STIM2Q9P246 746 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 SUN2Q9UH99 717 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 CLCA2Q9UQC9 943 aa10.31□□□□□ -0.76
CLCN4-204ENST00000454850 A0A1W2PR77 199 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 SPTLC2O15270 562 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 SDC3O75056 442 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 ZBED1O96006 694 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 NR3C1P04150 777 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 TRIM49P0CI25 452 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 TRIM49CP0CI26 452 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 CKMT2P17540 419 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 GCLMP48507 274 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 PSMD8P48556 350 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 NASPP49321 788 aaPredicted RBP10.3□□□□□ -0.76
CLCN4-204ENST00000454850 PCBP4P57723 403 aaKnown RBP10.3□□□□□ -0.76
CLCN4-204ENST00000454850 NXPH1P58417 271 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 ST8SIA6P61647 398 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 INSM1Q01101 510 aaPredicted RBP10.3□□□□□ -0.76
CLCN4-204ENST00000454850 PDE4CQ08493 712 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 LY6DQ14210 128 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 C1orf220Q5T0J3 134 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 ADGRF1Q5T601 910 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 BROXQ5VW32 411 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLCN4-204ENST00000454850 FAM181AQ8N9Y4 354 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 OR2T34Q8NGX1 318 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 RNF139Q8WU17 664 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 BACH2Q9BYV9 841 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 SEMA4CQ9C0C4 833 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 DNAI2Q9GZS0 605 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 CLMPQ9H6B4 373 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 CYP3A43Q9HB55 503 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 OLA1Q9NTK5 396 aaKnown RBP10.3□□□□□ -0.76
CLCN4-204ENST00000454850 DMAC2Q9NW81 257 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 SCML1Q9UN30 329 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 PCDHB1Q9Y5F3 818 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 MORC2Q9Y6X9 1032 aaPredicted RBP10.3□□□□□ -0.76
CLCN4-204ENST00000454850 FLNCQ14315 2725 aa10.3□□□□□ -0.76
CLCN4-204ENST00000454850 RP1P56715 2156 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
CLCN4-204ENST00000454850 GOLGA6L7A0A1B0GV03 622 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 CAPN8A6NHC0 703 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 TLR4O00206 839 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 TULP2O00295 520 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 POLR2DO15514 142 aaKnown RBP10.29□□□□□ -0.76
CLCN4-204ENST00000454850 C7P10643 843 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 KRT10P13645 584 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 CSKP41240 450 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 VAMP7P51809 220 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 TMPRSS3P57727 454 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 ZNF445P59923 1031 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 PPP2CBP62714 309 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 PPP2CAP67775 309 aa10.29□□□□□ -0.76
CLCN4-204ENST00000454850 SFSWAPQ12872 951 aaKnown RBP10.29□□□□□ -0.76
CLCN4-204ENST00000454850 ILKQ13418 452 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms