RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SETD9Q8NE22 299 aa12.31□□□□□ -0.44
SEC16A-207ENST00000453963 ZSWIM2Q8NEG5 633 aa12.31□□□□□ -0.44
SEC16A-207ENST00000453963 RORBQ92753 470 aa12.31□□□□□ -0.44
SEC16A-207ENST00000453963 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
SEC16A-207ENST00000453963 CINPQ9BW66 212 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-207ENST00000453963 TRHDEQ9UKU6 1024 aa12.31□□□□□ -0.44
SEC16A-207ENST00000453963 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 PDZK1P1A8MUH7 402 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 RNF225M0QZC1 329 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 GPR182O15218 404 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ZNF862O60290 1169 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 MED26O95402 600 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TGFB3P10600 412 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 KDELR1P24390 212 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 PSMB9P28065 219 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 RAP1GAPP47736 663 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 C1orf186Q6ZWK4 172 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 DNERQ8NFT8 737 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 RPRD1AQ96P16 312 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 CCDC28BQ9BUN5 200 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 WDR41Q9HAD4 459 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 HMG20AQ9NP66 347 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TBC1D13Q9NVG8 400 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 CYP3A4P08684 503 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 VIL1P09327 827 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 RPL14P50914 215 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TMC7Q7Z402 723 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 IRF2BP1Q8IU81 584 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 PGBD3Q8N328 593 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 FAM120BQ96EK7 910 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 SEPHS2Q99611 448 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 PHACTR1Q9C0D0 580 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ACSS3Q9H6R3 686 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 CYLDQ9NQC7 956 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 F8W810 466 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 MAP3K13O43283 966 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ASNA1O43681 348 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TKTP29401 623 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 VAC14Q08AM6 782 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 BST1Q10588 318 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 DGUOKQ16854 277 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 OTUD3Q5T2D3 398 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TMC5Q6UXY8 1006 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TRABD2AQ86V40 505 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ATG16L2Q8NAA4 619 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ACMSDQ8TDX5 336 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ASB2Q96Q27 587 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 MRPS26Q9BYN8 205 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 KCNMB3Q9NPA1 279 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 NMRK1Q9NWW6 199 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 DOLKQ9UPQ8 538 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TPRKBQ9Y3C4 175 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 F8VP50 259 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 H3BRB1 525 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 GLP2RO95838 553 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 DSG3P32926 999 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ALDH7A1P49419 539 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 MARSP56192 900 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 SLC25A3Q00325 362 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 IL17AQ16552 155 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 C1orf50Q9BV19 199 aa12.3□□□□□ -0.44
SEC16A-207ENST00000453963 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ABI2Q9NYB9 513 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-207ENST00000453963 ZMYM2Q9UBW7 1377 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 EML1O00423 815 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 CHKAP35790 457 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 CASP5P51878 434 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 FRG1Q14331 258 aaKnown RBP12.29□□□□□ -0.44
SEC16A-207ENST00000453963 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
SEC16A-207ENST00000453963 APOBEC3HQ6NTF7 200 aaKnown RBP12.29□□□□□ -0.44
SEC16A-207ENST00000453963 CYP2R1Q6VVX0 501 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 PALB2Q86YC2 1186 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 EID3Q8N140 333 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 FBXW8Q8N3Y1 598 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 COLEC11Q9BWP8 271 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 UGT2B28Q9BY64 529 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 PARVBQ9HBI1 364 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 DDX4Q9NQI0 724 aaKnown RBP12.29□□□□□ -0.44
SEC16A-207ENST00000453963 CPA4Q9UI42 421 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 TSPAN16Q9UKR8 245 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 PCDHB7Q9Y5E2 793 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 PNMA8CA0A1B0GUJ8 204 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 PLSCR1O15162 318 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 VPS4BO75351 444 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 PIGNO95427 931 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 ITGAVP06756 1048 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 SERPINA6P08185 405 aa12.29□□□□□ -0.44
SEC16A-207ENST00000453963 RRM2P31350 389 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms