RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TBCBQ99426 244 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 TRIM8Q9BZR9 551 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 CLK4Q9HAZ1 481 aaKnown RBP14.24□□□□□ -0.13
ITGB4-202ENST00000449880 KRCC1Q9NPI7 259 aaPredicted RBP14.24□□□□□ -0.13
ITGB4-202ENST00000449880 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 IDH3BO43837 385 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 ENTPD5O75356 428 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 AKAP3O75969 853 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 SHBGP04278 402 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 ADSSP30520 456 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 PTPN7P35236 360 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 GOLGA7BQ2TAP0 167 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 ARHGAP15Q53QZ3 475 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 DACT2Q5SW24 774 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 TTC23Q5W5X9 447 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 SNX32Q86XE0 403 aa14.24□□□□□ -0.13
ITGB4-202ENST00000449880 BHLHE22Q8NFJ8 381 aaPredicted RBP14.24□□□□□ -0.13
ITGB4-202ENST00000449880 REXO4Q9GZR2 422 aaKnown RBP14.24□□□□□ -0.13
ITGB4-202ENST00000449880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.24□□□□□ -0.13
ITGB4-202ENST00000449880 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 CLUHO75153 1309 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 NCAM2O15394 837 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 RHOBTB1O94844 696 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 PAEPP09466 180 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 HARS2P49590 506 aaKnown RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 FOLH1Q04609 750 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ACAP1Q15027 740 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ANKRD13AQ8IZ07 590 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 SAMD3Q8N6K7 520 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ACMSDQ8TDX5 336 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 PLEKHG4BQ96PX9 1271 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 CGRRF1Q99675 332 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ARMCX1Q9P291 453 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ADGRA2Q96PE1 1338 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 VIRMAQ69YN4 1812 aaKnown RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 MATN2O00339 956 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 VDRP11473 427 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 CCNA2P20248 432 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 RHBDL3P58872 404 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 LPIN1Q14693 890 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 FUT11Q495W5 492 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 LIN52Q52LA3 116 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 NOTUMQ6P988 496 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 GALNT15Q8N3T1 639 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 MAB21L3Q8N8X9 362 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ADCY4Q8NFM4 1077 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 PIWIL2Q8TC59 973 aaKnown RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 GIPC3Q8TF64 312 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 EDF1O60869 148 aaKnown RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 GSCP56915 257 aaPredicted RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 SLC20A1Q8WUM9 679 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 CLIC5Q9NZA1 410 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ADAM28Q9UKQ2 775 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 NDUFAF1Q9Y375 327 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 TRIM38O00635 465 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 SMNDC1O75940 238 aaKnown RBP eCLIP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 ARIH2O95376 493 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 SCARA3Q6AZY7 606 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 TIGD7Q6NT04 549 aaPredicted RBP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 RNF180Q86T96 592 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 GLT1D1Q96MS3 346 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 WDR41Q9HAD4 459 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.23□□□□□ -0.13
ITGB4-202ENST00000449880 PTTG2Q9NZH5 202 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 KLHL20Q9Y2M5 609 aa14.23□□□□□ -0.13
ITGB4-202ENST00000449880 MAGEC1O60732 1142 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 MSH3P20585 1137 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 PIK3R1P27986 724 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 OR1G1P47890 313 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 NAA20P61599 178 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 TGFB2P61812 414 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 CYP4A22Q5TCH4 519 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 C6orf62Q9GZU0 229 aaPredicted RBP14.22□□□□□ -0.13
ITGB4-202ENST00000449880 IPPQ9Y573 584 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 IL12AP29459 219 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 HUNKP57058 714 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 EIF2B5Q13144 721 aaKnown RBP14.22□□□□□ -0.13
ITGB4-202ENST00000449880 FRG1Q14331 258 aaKnown RBP14.22□□□□□ -0.13
ITGB4-202ENST00000449880 GNASQ5JWF2 1037 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 PTRHD1Q6GMV3 140 aaKnown RBP14.22□□□□□ -0.13
ITGB4-202ENST00000449880 WDR59Q6PJI9 974 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 ULK2Q8IYT8 1036 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 ABRAQ8N0Z2 381 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 SFRP1Q8N474 314 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 RP9Q8TA86 221 aaKnown RBP14.22□□□□□ -0.13
ITGB4-202ENST00000449880 SLC7A14Q8TBB6 771 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 PNMA5Q96PV4 448 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 YIPF2Q9BWQ6 316 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 SYTL2Q9HCH5 934 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 BTBD3Q9Y2F9 522 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 E2F8A0AVK6 867 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 KRT87PA6NCN2 255 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 RAD51BO15315 384 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 CHADO15335 359 aa14.22□□□□□ -0.13
ITGB4-202ENST00000449880 STAG3L1P0CL83 205 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms