RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 ERLEC1Q96DZ1 483 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 SLC39A13Q96H72 371 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 MED15Q96RN5 788 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 TMEM121BQ9BXQ6 578 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 BTBD1Q9H0C5 482 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 SGK2Q9HBY8 427 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 FSCN3Q9NQT6 498 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 PCDHB9Q9Y5E1 797 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 PCDHGB2Q9Y5G2 931 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 CEP295Q9C0D2 2601 aa16.95■□□□□ 0.3
CTDSP1-204ENST00000443891 PCNX2A6NKB5 2137 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 CKAP5Q14008 2032 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 DNTTP04053 509 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 PRKCSHP14314 528 aaPredicted RBP16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 MAOBP27338 520 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 USP30Q70CQ3 517 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 GLRX5Q86SX6 157 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 TMEM110Q86TL2 294 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 ARHGEF19Q8IW93 802 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 C1orf216Q8TAB5 229 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 DQX1Q8TE96 717 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 GATA6Q92908 595 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 FCRL2Q96LA5 508 aaPredicted RBP16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 KREMEN1Q96MU8 473 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 SLC4A5Q9BY07 1137 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 INTS2Q9H0H0 1204 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 PRSS16Q9NQE7 514 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 TPX2Q9ULW0 747 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 CTNND2Q9UQB3 1225 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 CACNA1EQ15878 2313 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 USP24Q9UPU5 2620 aa16.94■□□□□ 0.3
CTDSP1-204ENST00000443891 CAPN9O14815 690 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 RNASEH1O60930 286 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 MOCS3O95396 460 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 FYNP06241 537 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 HLA-EP13747 358 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 SLC6A4P31645 630 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 MATKP42679 507 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 AFF3P51826 1226 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 TEAD4Q15561 434 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 TRIP6Q15654 476 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 MS4A13Q5J8X5 152 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 ZNF776Q68DI1 518 aaPredicted RBP16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 RFWD3Q6PCD5 774 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 NAXDQ8IW45 347 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 SCUBE3Q8IX30 993 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 ZCCHC9Q8N567 271 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 CYB5D2Q8WUJ1 264 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 LMLNQ96KR4 655 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 MIS12Q9H081 205 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 THAP9Q9H5L6 903 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 POPDC2Q9HBU9 364 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 UBE2TQ9NPD8 197 aaPredicted RBP16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 ST7Q9NRC1 585 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 NCKAP1Q9Y2A7 1128 aa16.93■□□□□ 0.3
CTDSP1-204ENST00000443891 SPAARA0A1B0GVQ0 90 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 TARSL2A2RTX5 802 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 C1QTNF9BB2RNN3 333 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SH3BP5O60239 455 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 APOEP02649 317 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 GLI1P08151 1106 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SRPRAP08240 638 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 C1QTNF9P0C862 333 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SLC2A3P11169 496 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 KRT5P13647 590 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 CD70P32970 193 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 GRIA4P48058 902 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SGSHP51688 502 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 RPS14P62263 151 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 YWHAZP63104 245 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SUZ12Q15022 739 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 NADSYN1Q6IA69 706 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 DBX2Q6ZNG2 339 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 RAB44Q7Z6P3 723 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 CLEC4CQ8WTT0 213 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 ZNF606Q8WXB4 792 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 BTN2A3PQ96KV6 586 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 RSPH9Q9H1X1 276 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 TMEM51Q9NW97 253 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 KIAA1522Q9P206 1035 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 SLC12A6Q9UHW9 1150 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 EIF2B4Q9UI10 523 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 APOBEC2Q9Y235 224 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-204ENST00000443891 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 GTPBP10A4D1E9 387 aaKnown RBP16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 PIK3R2O00459 728 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 HYAL3O43820 417 aaPredicted RBP16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 SEMA4FO95754 770 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 OXCT1P55809 520 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 STX17P56962 302 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 SNX16P57768 344 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 CDH18Q13634 790 aa16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 HNRNPA1L2Q32P51 320 aaKnown RBP16.91■□□□□ 0.3
CTDSP1-204ENST00000443891 TTC39BQ5VTQ0 682 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms