RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 DPYDQ12882 1025 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 TRIM29Q14134 588 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 E2F5Q15329 346 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 IFI16Q16666 785 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 ACCSLQ4AC99 568 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 HSP90AA4PQ58FG1 418 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 TCP11X2Q5H9J9 407 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 GKAP1Q5VSY0 366 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 DCAF12L1Q5VU92 463 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SLC30A9Q6PML9 568 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SFTPA1Q8IWL2 248 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SH2D3CQ8N5H7 860 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CCDC63Q8NA47 563 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SPDYE1Q8NFV5 336 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 ZNF507Q8TCN5 953 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SPPL2BQ8TCT7 592 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 NOC3LQ8WTT2 800 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 DNASE2BQ8WZ79 361 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SNX19Q92543 992 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 ERLEC1Q96DZ1 483 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CNDP2Q96KP4 475 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 ZFRQ96KR1 1074 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CAPZA3Q96KX2 299 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 ALS2CR12Q96Q35 445 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 PHF12Q96QT6 1004 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 PYM1Q9BRP8 204 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 KIFC3Q9BVG8 833 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 GPR174Q9BXC1 333 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 FOXP1Q9H334 677 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 NDST4Q9H3R1 872 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 CNOT10Q9H9A5 744 aaKnown RBP6.76□□□□□ -1.33
HDAC6-210ENST00000441703 LRRC4CQ9HCJ2 640 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 PTPRHQ9HD43 1115 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SLC12A6Q9UHW9 1150 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 MYH11P35749 1972 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 MYOFQ9NZM1 2061 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 AHCTF1Q8WYP5 2266 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 SCN1AP35498 2009 aa6.76□□□□□ -1.33
HDAC6-210ENST00000441703 NOTCH2Q04721 2471 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 GOLGA6L10A0A0M3HER8 536 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 A0A1W2PQJ5 194 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 TTC26A0AVF1 554 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 BLACEA4D250 179 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 GOLGA6L10A6NI86 522 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 BTBD18B2RXH4 712 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 BHMG1C9JSJ3 638 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 ZNF185O15231 689 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PJA2O43164 708 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 SUV39H1O43463 412 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PCDHGA12O60330 932 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 AP1G2O75843 785 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 WFS1O76024 890 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 ADH1CP00326 375 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 VIMP08670 466 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 MCF2P10911 925 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 HARSP12081 509 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 CYP11B2P19099 503 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PROZP22891 400 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 LRPAP1P30533 357 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 NTSR1P30989 418 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 TNFSF9P41273 254 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PAPOLAP51003 745 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PDE6CP51160 858 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 AFF3P51826 1226 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 ZBED6P86452 979 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 IL9RQ01113 521 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 BNC1Q01954 994 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 KIF5AQ12840 1032 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 DNAJC3Q13217 504 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 LBRQ14739 615 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 DHCR24Q15392 516 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 SAFBQ15424 915 aaKnown RBP eCLIP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 CALCRLQ16602 461 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 KIF19Q2TAC6 998 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 FIGNQ5HY92 759 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 BTBD8Q5XKL5 378 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 HIBCHQ6NVY1 386 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 WDR59Q6PJI9 974 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PADI6Q6TGC4 694 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PIK3AP1Q6ZUJ8 805 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 TMEM150AQ86TG1 271 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 CHPFQ8IZ52 775 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 LSMEM2Q8N112 164 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 ARL14EPQ8N8R7 260 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 CCDC197Q8NCU1 140 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 CFAP61Q8NHU2 1237 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 KCNV2Q8TDN2 545 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 C2orf15Q8WU43 125 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 LRRC45Q96CN5 670 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 STAMBPL1Q96FJ0 436 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 BICD1Q96G01 975 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 TOE1Q96GM8 510 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 PAGE5Q96GU1 130 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 IFT74Q96LB3 600 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 AIFM3Q96NN9 605 aa6.75□□□□□ -1.33
HDAC6-210ENST00000441703 ACO2Q99798 780 aaKnown RBP6.75□□□□□ -1.33
HDAC6-210ENST00000441703 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms