RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FOXP1Q9H334 677 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 TTC12Q9H892 705 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 RBM28Q9NW13 759 aaKnown RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 TFCP2L1Q9NZI6 479 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 CTTNBP2NLQ9P2B4 639 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ARPP21Q9UBL0 812 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZDHHC8Q9ULC8 765 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 TNFRSF18Q9Y5U5 241 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ARAP2Q8WZ64 1704 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF831Q5JPB2 1677 aa3.81□□□□□ -1.8
HMGB3P11-201ENST00000440127 AKAP11Q9UKA4 1901 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 LAMA4Q16363 1823 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 CYP2D7A0A087X1C5 515 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC78A2IDD5 438 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF785A8K8V0 405 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 BTBD18B2RXH4 712 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 F5H697 171 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 NEMFO60524 1076 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 NBNO60934 754 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SUN1O94901 812 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 BAG3O95817 575 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 GJB1P08034 283 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 HMGB2P26583 209 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 KLRK1P26718 216 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 HTR1BP28222 390 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 PEX2P28328 305 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC6A4P31645 630 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 IL12RB1P42701 662 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SYKP43405 635 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 NT5C2P49902 561 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 GSTO1P78417 241 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC10A2Q12908 348 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 GRAPQ13588 217 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TXNRD1Q16881 649 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 C3orf36Q3SXR2 165 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TUBB8Q3ZCM7 444 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 CD300EQ496F6 205 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 MEX3CQ5U5Q3 659 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SFRP4Q6FHJ7 346 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SHC4Q6S5L8 630 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 OLFM4Q6UX06 510 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 NPNTQ6UXI9 565 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 KRBA2Q6ZNG9 492 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 C15orf52Q6ZUT6 534 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 IQCA1Q86XH1 822 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 COL23A1Q86Y22 540 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 DHX40Q8IX18 779 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 DIS3L2Q8IYB7 885 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 NKAPQ8N5F7 415 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 CAMKK1Q8N5S9 505 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TMIEQ8NEW7 156 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 CTCFLQ8NI51 663 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC30A5Q8TAD4 765 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 MYCBPAPQ8TBZ2 947 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 GRAPLQ8TC17 118 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 KIAA1524Q8TCG1 905 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 NTN5Q8WTR8 489 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 POF1BQ8WVV4 589 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TFAP2BQ92481 460 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 SMG7Q92540 1137 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 RAB24Q969Q5 203 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 RGMAQ96B86 450 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 MOGAT1Q96PD6 335 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TPSD1Q9BZJ3 242 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRDM13Q9H4Q3 707 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 ATP8A2Q9NTI2 1148 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 ASB6Q9NWX5 421 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 AATFQ9NY61 560 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 EHD3Q9NZN3 535 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 CLIP2Q9UDT6 1046 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 HOOK1Q9UJC3 728 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TUBE1Q9UJT0 475 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 KCNJ14Q9UNX9 436 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 HPSEQ9Y251 543 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 FRMD4BQ9Y2L6 1034 aa3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 DDX60Q8IY21 1712 aaKnown RBP3.8□□□□□ -1.8
HMGB3P11-201ENST00000440127 TIAM2Q8IVF5 1701 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 A0A087WWV3 80 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 UBE2Q2LH0YL09 131 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 IKBKBO14920 756 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRDM1O75626 825 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 BBOX1O75936 387 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZFPL1O95159 310 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 BMP15O95972 392 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 SERPINB2P05120 415 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CHRM2P08172 466 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PPP3CBP16298 524 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 NDUFB7P17568 137 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CD53P19397 219 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRDX5P30044 214 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CD6P30203 668 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 KIF5BP33176 963 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 KRT2P35908 639 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PTH2RP49190 550 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 TOB1P50616 345 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF135P52742 658 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CACNB3P54284 484 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 TROAPQ12815 778 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 IL10RAQ13651 578 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms