RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PUM1Q14671 1186 aaKnown RBP eCLIP18.33■□□□□ 0.53
CCDC188-201ENST00000439765 ASTE1Q2TB18 679 aaPredicted RBP18.33■□□□□ 0.53
CCDC188-201ENST00000439765 C2orf27AQ580R0 203 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 TRNP1Q6NT89 227 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 MON1BQ7L1V2 547 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 WDR5BQ86VZ2 330 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 EMC1Q8N766 993 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 RNF34Q969K3 372 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 CCDC42Q96M95 316 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 KCNF1Q9H3M0 494 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 ZDHHC4Q9NPG8 344 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 THADAQ6YHU6 1953 aa18.33■□□□□ 0.53
CCDC188-201ENST00000439765 SOWAHDA6NJG2 315 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 TMCO5BA8MYB1 307 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 GBP1P32455 592 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 DGKGP49619 791 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 SIM2Q14190 667 aaPredicted RBP18.33■□□□□ 0.52
CCDC188-201ENST00000439765 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 VPS36Q86VN1 386 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 PHF13Q86YI8 300 aaPredicted RBP18.33■□□□□ 0.52
CCDC188-201ENST00000439765 CCDC170Q8IYT3 715 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 CFAP57Q96MR6 1250 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 PRICKLE1Q96MT3 831 aaPredicted RBP18.33■□□□□ 0.52
CCDC188-201ENST00000439765 TBCBQ99426 244 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 NPY6RQ99463 290 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 DEF6Q9H4E7 631 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 PIGVQ9NUD9 493 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 POLR3BQ9NW08 1133 aaPredicted RBP18.33■□□□□ 0.52
CCDC188-201ENST00000439765 TAS2R14Q9NYV8 317 aa18.33■□□□□ 0.52
CCDC188-201ENST00000439765 PLXND1Q9Y4D7 1925 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 TBC1D3BA6NDS4 549 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 LRP3O75074 770 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 CALB1P05937 261 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 RETP07949 1114 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 HOXD9P28356 352 aaPredicted RBP18.32■□□□□ 0.52
CCDC188-201ENST00000439765 HOXC13P31276 330 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 LMNB2Q03252 620 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 EIF4EBP2Q13542 120 aaPredicted RBP18.32■□□□□ 0.52
CCDC188-201ENST00000439765 MPPE1Q53F39 396 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 HEATR6Q6AI08 1181 aaKnown RBP18.32■□□□□ 0.52
CCDC188-201ENST00000439765 PRR23BQ6ZRT6 265 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 CHSY1Q86X52 802 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC188-201ENST00000439765 ADAMTS1Q9UHI8 967 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 TMEM59LQ9UK28 342 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 CLEC4EQ9ULY5 219 aa18.32■□□□□ 0.52
CCDC188-201ENST00000439765 GFRA2O00451 464 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 DDX3XO00571 662 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 ARHGAP6O43182 974 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 AKR1B10O60218 316 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 ABCB4P21439 1286 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 CCR1P32246 355 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 TIE1P35590 1138 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 DEKP35659 375 aaKnown RBP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 CYLC1P35663 651 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 PI4KAP42356 2102 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 SRSF5Q13243 272 aaKnown RBP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 LPAL2Q16609 132 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 PREPLQ4J6C6 727 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 PIK3R6Q5UE93 754 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 RAP1GAP2Q684P5 730 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 RAD9BQ6WBX8 426 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 DNAAF5Q86Y56 855 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 CAMKK1Q8N5S9 505 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 JOSD2Q8TAC2 188 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 USP33Q8TEY7 942 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 TMA16Q96EY4 203 aaKnown RBP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 MYEOVQ96EZ4 313 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 BTN2A3PQ96KV6 586 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 PARD6AQ9NPB6 346 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 RRN3Q9NYV6 651 aa18.31■□□□□ 0.52
CCDC188-201ENST00000439765 EPN1Q9Y6I3 576 aaPredicted RBP18.31■□□□□ 0.52
CCDC188-201ENST00000439765 MUC22E2RYF6 1773 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 A0A087X0T9 212 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 KCNU1A8MYU2 1149 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 PRR5-ARHGAP8B1AHC4 643 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 TBL1XO60907 577 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 FAM228BP0C875 321 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 SLC2A3P11169 496 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 GGCXP38435 758 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ATXN1P54253 815 aaKnown RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 GSCP56915 257 aaPredicted RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 RPS24P62847 133 aaKnown RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ARHGAP8P85298 464 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ATP11AP98196 1134 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 DEUP1Q05D60 604 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 C1QBPQ07021 282 aaKnown RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 SLC18A3Q16572 532 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 CDO1Q16878 200 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 SLC25A52Q3SY17 297 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 EMC10Q5UCC4 262 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ACAD10Q6JQN1 1059 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 DNAJC24Q6P3W2 148 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 CCDC33Q8N5R6 958 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ALLCQ8N6M5 410 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 ATP6V0D2Q8N8Y2 350 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 HJURPQ8NCD3 748 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms