RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 PCDHB7Q9Y5E2 793 aa4.46□□□□□ -1.7
LINC00353-201ENST00000435401 HS3ST3B1Q9Y662 390 aa4.46□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A18PA6NE21 464 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A16PA6NEW6 464 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A9PA6NNJ1 464 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A5PA8MXJ8 464 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 B9A039 149 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 H3BNX3 289 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 PPP6R2O75170 966 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 CNOT3O75175 753 aaKnown RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 RPP40O75818 363 aaKnown RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 CRYABP02511 175 aaKnown RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A15PP0C7V4 464 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A14PP0C7W9 464 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 TMEM225BP0DP42 221 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 CTSAP10619 480 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 CREB1P16220 341 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 DIO1P49895 249 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 EIF4A1P60842 406 aaKnown RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 RPS13P62277 151 aaKnown RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 AASDHQ4L235 1098 aaPredicted RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 VSTM1Q6UX27 236 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 MOGAT3Q86VF5 341 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 ANKRD13BQ86YJ7 626 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 C16orf71Q8IYS4 520 aaPredicted RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 GALNT15Q8N3T1 639 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 ARFGAP1Q8N6T3 406 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 LINC01465Q8N7H1 131 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 SMRP1Q8NCR6 262 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 CSGALNACT1Q8TDX6 532 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 ZFYVE19Q96K21 471 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 TRMOQ9BU70 441 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 ISCA1Q9BUE6 129 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 MECRQ9BV79 373 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 HEY2Q9UBP5 337 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 NKX1-2Q9UD57 310 aaPredicted RBP4.45□□□□□ -1.7
LINC00353-201ENST00000435401 STEAP1Q9UHE8 339 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 DAPP1Q9UN19 280 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 SQORQ9Y6N5 450 aa4.45□□□□□ -1.7
LINC00353-201ENST00000435401 CCDC180Q9P1Z9 1646 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 KIF28PB7ZC32 967 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 M0QYT0 321 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 PSG1P11464 419 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 CYP19A1P11511 503 aaPredicted RBP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 ALADP13716 330 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 AP2B1P63010 937 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 BIRC3Q13489 604 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 BFSP2Q13515 415 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 CUL4BQ13620 913 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SEMA3AQ14563 771 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 CLCA4Q14CN2 919 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 AWAT1Q58HT5 328 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 DCDC5Q6ZRR9 648 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 UBE2Q1Q7Z7E8 422 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 CCDC117Q8IWD4 279 aaPredicted RBP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SMAP1Q8IYB5 467 aaPredicted RBP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SLC22A17Q8WUG5 538 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 PPM1EQ8WY54 764 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 RUBCNQ92622 972 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 HS6ST2Q96MM7 605 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SAP30LQ9HAJ7 183 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
LINC00353-201ENST00000435401 PRDM8Q9NQV8 689 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 PCDHB2Q9Y5E7 798 aa4.44□□□□□ -1.7
LINC00353-201ENST00000435401 TMPRSS11DO60235 418 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 TULP3O75386 442 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 PAX3P23760 479 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 THBS4P35443 961 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 NANOS2P60321 138 aaKnown RBP4.43□□□□□ -1.7
LINC00353-201ENST00000435401 HSF1Q00613 529 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 CFHR3Q02985 330 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 CFHR1Q03591 330 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 PPFIA1Q13136 1202 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 SEC23BQ15437 767 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 CCDC144NLQ6NUI1 221 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 LVRNQ6Q4G3 990 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 P3H2Q8IVL5 708 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 NRSN1Q8IZ57 195 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 MAFAQ8NHW3 353 aaPredicted RBP4.43□□□□□ -1.7
LINC00353-201ENST00000435401 DDX23Q9BUQ8 820 aaKnown RBP4.43□□□□□ -1.7
LINC00353-201ENST00000435401 TAF1DQ9H5J8 278 aaPredicted RBP4.43□□□□□ -1.7
LINC00353-201ENST00000435401 TRIM36Q9NQ86 728 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 CNTN6Q9UQ52 1028 aa4.43□□□□□ -1.7
LINC00353-201ENST00000435401 B4DGG1 531 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 CTIFO43310 598 aaKnown RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 FAM155BO75949 473 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 CYP21A2P08686 494 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 CD19P15391 556 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 GSTM5P46439 218 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ARL4CP56559 192 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 FAM3BP58499 235 aaPredicted RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ERV3-1Q14264 604 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms