RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TBC1D5Q92609 795 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 ATP2A3Q93084 1043 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZUFSPQ96AP4 578 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 REPS1Q96D71 796 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF845Q96IR2 970 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 CLSTN3Q9BQT9 956 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 TAOK3Q9H2K8 898 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 SYNPO2LQ9H987 977 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 PDE11AQ9HCR9 933 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 BLOC1S4Q9NUP1 217 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZDHHC7Q9NXF8 308 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 MTMR4Q9NYA4 1195 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 SLC25A10Q9UBX3 287 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 BAG5Q9UL15 447 aa3.51□□□□□ -1.85
HMGB1P27-201ENST00000431429 SPATA31A5Q5VU36 1347 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 SPATA31A6Q5VVP1 1343 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 SPATA31A7Q8IWB4 1347 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 KDM3AQ9Y4C1 1321 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 KAT6AQ92794 2004 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3DA0A087WVF3 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3IA0A087WXS9 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3EA0A087X179 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3KA0A087X1G2 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 GOLGA6L10A0A0M3HER8 536 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TCRBV5S1A1TA0A578 114 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3BA6NDS4 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3FA6NER0 549 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3LB9A6J9 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 H7C1Q1 480 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 GCOM1H8Y6P7 765 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 USO1O60763 962 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 C1RP00736 705 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ALDOAP04075 364 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 IFIT1P09914 478 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3HP0C7X1 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TNNT1P13805 278 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ZNF37AP17032 561 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 KRT4P19013 534 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 PRPH2P23942 346 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ABCD3P28288 659 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 NDUFS1P28331 727 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 AVPR2P30518 371 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 STAT6P42226 847 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 PCP4P48539 62 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 AGTR2P50052 363 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 PDE1AP54750 535 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 CASP6P55212 293 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 EEFSECP57772 596 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 MRPS35P82673 323 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 CDK18Q07002 472 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 GALNT2Q10471 571 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBL3Q12788 808 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 FOXD4Q12950 439 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 PTP4A2Q12974 167 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 PTPAQ15257 358 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 LSM12Q3MHD2 195 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3GQ6DHY5 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3CQ6IPX1 549 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TMEM88Q6PEY1 159 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 BRINP3Q76B58 766 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D3Q8IZP1 549 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 SLC44A3Q8N4M1 653 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ENDOVQ8N8Q3 282 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 NGDNQ8NEJ9 315 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ACTRT2Q8TDY3 377 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 SLC9A6Q92581 669 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ELP4Q96EB1 424 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 RNF125Q96EQ8 232 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 MMS19Q96T76 1030 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TREX2Q9BQ50 279 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 STN1Q9H668 368 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ACAD9Q9H845 621 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TLR8Q9NR97 1041 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 SMC4Q9NTJ3 1288 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TBC1D22BQ9NU19 505 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 B3GNT3Q9Y2A9 372 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 ENTPD2Q9Y5L3 495 aa3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 TDRD9Q8NDG6 1382 aaKnown RBP3.5□□□□□ -1.85
HMGB1P27-201ENST00000431429 CC2D2AQ9P2K1 1620 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 A0A1W2PQM1 296 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 GAGE10A6NGK3 116 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 MGST3O14880 152 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 EIF5BO60841 1220 aaKnown RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 TULP3O75386 442 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 PDE8BO95263 885 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 METTL18O95568 372 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 TTLL1O95922 423 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 MT-CO3P00414 261 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 LDHCP07864 332 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 RFPL3SP0C7P2 107 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 LYL1P12980 280 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 WT1P19544 449 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 HOXD12P35452 270 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 AVPR1BP47901 424 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 SLC37A1P57057 533 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 WDR5P61964 334 aaKnown RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 CYP4F2P78329 520 aa3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 SIM1P81133 766 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P27-201ENST00000431429 B4GALNT1Q00973 533 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms