RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 HIRAP54198 1017 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 ANKS6Q68DC2 871 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 C16orf89Q6UX73 402 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 DNAJC14Q6Y2X3 702 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 EXD1Q8NHP7 514 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 FAR2Q96K12 515 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 RSPH9Q9H1X1 276 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 RNPEPQ9H4A4 650 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ELOVL6Q9H5J4 265 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 YY1AP1Q9H869 796 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 USE1Q9NZ43 259 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 HEY2Q9UBP5 337 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 CTNNAL1Q9UBT7 734 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 VPS9D1Q9Y2B5 631 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SPACA6W5XKT8 324 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 TRAV19A0A0A6YYK7 116 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 KRT87PA6NCN2 255 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 PSMD12O00232 456 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 TREHO43280 583 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 TBL3Q12788 808 aaKnown RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 NR6A1Q15406 480 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 TRIP10Q15642 601 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ZPBP2Q6X784 338 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SLC35C1Q96A29 364 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 RGS18Q9NS28 235 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 PHTF1Q9UMS5 762 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 GPSM3Q9Y4H4 160 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 UMODL1Q5DID0 1318 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SCAMP1O15126 338 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 RASSF9O75901 435 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 FARP2O94887 1054 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 CD86P42081 329 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 GSSP48637 474 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 CNTN1Q12860 1018 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 IL17AQ16552 155 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ECM1Q16610 540 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 INSCQ1MX18 579 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 LRIG3Q6UXM1 1119 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SERPINA13PQ6UXR4 307 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SGSM3Q96HU1 749 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 CATSPER2Q96P56 530 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 MIEF1Q9NQG6 463 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 GID8Q9NWU2 228 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 UXTQ9UBK9 157 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 ZNHIT2Q9UHR6 403 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 OR1D2P34982 312 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 HNF4AP41235 474 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 DUSP4Q13115 394 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 AASDHPPTQ9NRN7 309 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 TBC1D13Q9NVG8 400 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNX13-203ENST00000428135 BTBD7Q9P203 1132 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 OR12D3Q9UGF7 316 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 SLIT2O94813 1529 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 DDX3XO00571 662 aaKnown RBP eCLIP9.95□□□□□ -0.823e-18■■■□□ 15.2
SNX13-203ENST00000428135 XPO1O14980 1071 aaKnown RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 MDM4O15151 490 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 GLRA3O75311 464 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 GZMAP12544 262 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 APLP1P51693 650 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ALKBH2Q6NS38 261 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 FAM180AQ6UWF9 173 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 NIPA1Q7RTP0 329 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 RPAINQ86UA6 219 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 KCNMB4Q86W47 210 aa9.95□□□□□ -0.82
SNX13-203ENST00000428135 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 ACO2Q99798 780 aaKnown RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 SF3B1O75533 1304 aaKnown RBP eCLIP9.95□□□□□ -0.825e-6■■■■■ 70.3
SNX13-203ENST00000428135 CICQ96RK0 1608 aaPredicted RBP9.95□□□□□ -0.82
SNX13-203ENST00000428135 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SMNDC1O75940 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX13-203ENST00000428135 MMP13P45452 471 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 THOP1P52888 689 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SNAP47Q5SQN1 464 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ZCCHC23Q6ZST2 131 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SH3BP5LQ7L8J4 393 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ING5Q8WYH8 240 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 CMTM5Q96DZ9 223 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 MTMR9Q96QG7 549 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 CDK5RAP1Q96SZ6 601 aaKnown RBP9.94□□□□□ -0.82
SNX13-203ENST00000428135 TBL1YQ9BQ87 522 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 TUBGCP4Q9UGJ1 667 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 A0A0U1RQJ8 604 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 NUDT14O95848 222 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 RENBPP51606 427 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 C1QBPQ07021 282 aaKnown RBP9.94□□□□□ -0.82
SNX13-203ENST00000428135 C4orf22Q6V702 233 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ZNF438Q7Z4V0 828 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 MRPL45Q9BRJ2 306 aaKnown RBP9.94□□□□□ -0.82
SNX13-203ENST00000428135 ADAMTSL3P82987 1691 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SALL3Q9BXA9 1300 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 WNT7AO00755 349 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 GLI1P08151 1106 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SKOR1P84550 965 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 HECTD3Q5T447 861 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 IYDQ6PHW0 289 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 TRPM8Q7Z2W7 1104 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms