RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HSF5Q4G112 596 aaPredicted RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 RAB6CQ53S08 254 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 RNF43Q68DV7 783 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 TRMT11Q7Z4G4 463 aaKnown RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 ZDHHC17Q8IUH5 632 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 LGI2Q8N0V4 545 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 CARNMT1Q8N4J0 409 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 FAM160A2Q8N612 972 aaPredicted RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 FRMD1Q8N878 549 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 HJURPQ8NCD3 748 aaPredicted RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 RNF34Q969K3 372 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 AZIN2Q96A70 460 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 TBCBQ99426 244 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 NPY6RQ99463 290 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 GABRG3Q99928 467 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 SLC2A11Q9BYW1 496 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 RAB6CQ9H0N0 254 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 CD248Q9HCU0 757 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 CD93Q9NPY3 652 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 TMPRSS4Q9NRS4 437 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 SEPT11Q9NVA2 429 aaKnown RBP14.12□□□□□ -0.15
SNX3-204ENST00000426155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNX3-204ENST00000426155 BCCIPQ9P287 314 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNX3-204ENST00000426155 EBF1Q9UH73 591 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 GGA2Q9UJY4 613 aa14.12□□□□□ -0.15
SNX3-204ENST00000426155 DOCK4Q8N1I0 1966 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 KCNU1A8MYU2 1149 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 GABRG2P18507 467 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 MMP8P22894 467 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 PRKCHP24723 683 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 CNR2P34972 360 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 IRAK1P51617 712 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 FANCCQ00597 558 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 CENPCQ03188 943 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 PTP4A2Q12974 167 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 ZNF234Q14588 700 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 CLEC16AQ2KHT3 1053 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 FUT11Q495W5 492 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 FILIP1LQ4L180 1135 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 FSCBQ5H9T9 825 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 CHST9Q7L1S5 443 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 ADIPOR2Q86V24 386 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 MFN1Q8IWA4 741 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 KIAA2013Q8IYS2 634 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 PGBD3Q8N328 593 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 ZNF366Q8N895 744 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 JOSD2Q8TAC2 188 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 KCNV2Q8TDN2 545 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 CYB5D2Q8WUJ1 264 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 BTN2A3PQ96KV6 586 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 CFAP57Q96MR6 1250 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 PRMT1Q99873 361 aaKnown RBP14.11□□□□□ -0.15
SNX3-204ENST00000426155 AGPAT1Q99943 283 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 PARD6AQ9NPB6 346 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNX3-204ENST00000426155 ELOVL2Q9NXB9 296 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 TMEM59LQ9UK28 342 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 RAB23Q9ULC3 237 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 SNX10Q9Y5X0 201 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 STON1Q9Y6Q2 735 aa14.11□□□□□ -0.15
SNX3-204ENST00000426155 ADCY5O95622 1261 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 PABPC1P11940 636 aaKnown RBP14.1□□□□□ -0.15
SNX3-204ENST00000426155 HLA-EP13747 358 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 NDUFV2P19404 249 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 ABCB4P21439 1286 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 CCR1P32246 355 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 GBP1P32455 592 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 LMAN2Q12907 356 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 NR1I3Q14994 352 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 CCDC6Q16204 474 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 SKOR2Q2VWA4 1001 aaPredicted RBP14.1□□□□□ -0.15
SNX3-204ENST00000426155 LAIR1Q6GTX8 287 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 IRF2BP2Q7Z5L9 587 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 CACUL1Q86Y37 369 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 DNAAF5Q86Y56 855 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.1□□□□□ -0.15
SNX3-204ENST00000426155 ATP6V0D2Q8N8Y2 350 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 MSANTD4Q8NCY6 345 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 LMLNQ96KR4 655 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 TTYH3Q9C0H2 523 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 THAP10Q9P2Z0 257 aaPredicted RBP14.1□□□□□ -0.15
SNX3-204ENST00000426155 HS3ST4Q9Y661 456 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 SPTBN4Q9H254 2564 aa14.1□□□□□ -0.15
SNX3-204ENST00000426155 A0A1W2PQC6 194 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 TYW5A2RUC4 315 aaKnown RBP14.09□□□□□ -0.15
SNX3-204ENST00000426155 F5H5T6 163 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 PAGE1O75459 146 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 ALDH1A2O94788 518 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 LUC7L3O95232 432 aaKnown RBP14.09□□□□□ -0.15
SNX3-204ENST00000426155 FERP16591 822 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 SCNN1AP37088 669 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 NSFP46459 744 aaKnown RBP14.09□□□□□ -0.15
SNX3-204ENST00000426155 TPM4P67936 248 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 DEUP1Q05D60 604 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 SPEM2Q0P670 501 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 CDH18Q13634 790 aa14.09□□□□□ -0.15
SNX3-204ENST00000426155 EIF4HQ15056 248 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms