RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 RBP5P82980 135 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 OVGP1Q12889 678 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 EIF3IQ13347 325 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 GNL2Q13823 731 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 NR0B2Q15466 257 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 CST6Q15828 149 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ECM1Q16610 540 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SOWAHAQ2M3V2 549 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 KRT79Q5XKE5 535 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SLFN12LQ6IEE8 588 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 CAPRIN2Q6IMN6 1127 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 GUSBP11Q6P575 273 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SND1Q7KZF4 910 aaKnown RBP eCLIP6.62□□□□□ -1.353e-10■■■□□ 16.4
SDCBP-203ENST00000424270 CHST9Q7L1S5 443 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ZFAND4Q86XD8 727 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 NT5DC4Q86YG4 428 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 MMAAQ8IVH4 418 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 MYCT1Q8N699 235 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 IL22RA1Q8N6P7 574 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 LRRC52Q8N7C0 313 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SCAMP5Q8TAC9 235 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PRR7Q8TB68 274 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PDCD6IPQ8WUM4 868 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 POMGNT1Q8WZA1 660 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 GLMNQ92990 594 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 HEXIM2Q96MH2 286 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 DUSP9Q99956 384 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 NTPCRQ9BSD7 190 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 KLF16Q9BXK1 252 aaPredicted RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF518BQ9C0D4 1074 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 DONSONQ9NYP3 566 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SERGEFQ9UGK8 458 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 GGT7Q9UJ14 662 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ITGA11Q9UKX5 1188 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PHTF1Q9UMS5 762 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF510Q9Y2H8 683 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 CEP83Q9Y592 693 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 ZFC3H1O60293 1989 aaKnown RBP6.62□□□□□ -1.35
SDCBP-203ENST00000424270 PLXNA2O75051 1894 aa6.62□□□□□ -1.35
SDCBP-203ENST00000424270 SPTBN1Q01082 2364 aaKnown RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 ICE1Q9Y2F5 2266 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CACNA1DQ01668 2161 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 TP53BP1Q12888 1972 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PRAMEF33A0A0G2JMD5 474 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 SLC12A8A0AV02 714 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 H3BM21 787 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 TMX2-CTNND1H3BSU7 103 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 K7ESM1 405 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CLDN5O00501 218 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 GABRDO14764 452 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 MDM4O15151 490 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FAM189A1O60320 539 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PRAMEF10O60809 474 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 DTNBO60941 627 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FAM13AO94988 1023 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CLDN1O95832 211 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PENKP01210 267 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 ADRB2P07550 413 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 RNF224P0DH78 156 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PRKAR1AP10644 381 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 POLR2EP19388 210 aaKnown RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CDC25AP30304 524 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 SLC8A1P32418 973 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 GNL1P36915 607 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PLA2G4AP47712 749 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 HARS2P49590 506 aaKnown RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CACNA2D1P54289 1103 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 EHHADHQ08426 723 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 KCNMA1Q12791 1236 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 MAPK7Q13164 816 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FGL2Q14314 439 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 KCNJ12Q14500 433 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF174Q15697 407 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 SETMARQ53H47 684 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 ZNF542PQ5EBM4 170 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 TMEM164Q5U3C3 297 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FYB2Q5VWT5 728 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 ZCCHC8Q6NZY4 707 aaKnown RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 IQCHQ86VS3 1027 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 GALNT11Q8NCW6 608 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 WDR48Q8TAF3 677 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 WFIKKN2Q8TEU8 576 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 JAKMIP2Q96AA8 810 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 POM121Q96HA1 1249 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 HPDLQ96IR7 371 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PIWIL1Q96J94 861 aaKnown RBP6.61□□□□□ -1.35
SDCBP-203ENST00000424270 CDK5RAP3Q96JB5 506 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 IL12RB2Q99665 862 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FAM213AQ9BRX8 229 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 FOXP3Q9BZS1 431 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 MTG2Q9H4K7 406 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 RUBCNLQ9H714 662 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 PRDM8Q9NQV8 689 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 KLHL11Q9NVR0 708 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 GDAP2Q9NXN4 497 aa6.61□□□□□ -1.35
SDCBP-203ENST00000424270 IPO11Q9UI26 975 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms