RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ZNF347Q96SE7 839 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 APOL6Q9BWW8 343 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 ANKRD60Q9BZ19 345 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 C20orf27Q9GZN8 174 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 COQ10BQ9H8M1 238 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 AASDHPPTQ9NRN7 309 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.56□□□□□ -1.36
CCNT1-202ENST00000417344 TMEM9Q9P0T7 183 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 AGO2Q9UKV8 859 aaKnown RBP6.56□□□□□ -1.36
CCNT1-202ENST00000417344 PRPF19Q9UMS4 504 aaKnown RBP6.56□□□□□ -1.36
CCNT1-202ENST00000417344 ZNF652Q9Y2D9 606 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 ANGPTL3Q9Y5C1 460 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 DOCK2Q92608 1830 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 KAT6BQ8WYB5 2073 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 UBR1Q8IWV7 1749 aa6.56□□□□□ -1.36
CCNT1-202ENST00000417344 BAZ2BQ9UIF8 2168 aaKnown RBP6.56□□□□□ -1.36
CCNT1-202ENST00000417344 ZSCAN5BA6NJL1 495 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GOLGA8SH3BPF8 625 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GOLGA8MH3BSY2 632 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 SLC22A1O15245 554 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CAPN5O15484 640 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 SCO2O43819 266 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NUAK1O60285 661 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ZC3H11AO75152 810 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GCATO75600 419 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CLPXO76031 633 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 BCL10O95999 233 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 KRT10P13645 584 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ETS1P14921 441 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PRKCAP17252 672 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CCNA2P20248 432 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TGM1P22735 817 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 RPL10P27635 214 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MAPK4P31152 587 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 IDUAP35475 653 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NR4A2P43354 598 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 SLC12A3P55017 1021 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 DYNLL1P63167 89 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MYL7Q01449 175 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 FAAP100Q0VG06 881 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NME3Q13232 169 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TRIM28Q13263 835 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 IKBKEQ14164 716 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ZNF846Q147U1 533 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 RAB39AQ14964 217 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CRY1Q16526 586 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ABCB5Q2M3G0 1257 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PGS1Q32NB8 556 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CDONQ4KMG0 1287 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PPP6R3Q5H9R7 873 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ATAD3BQ5T9A4 648 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PDPK2PQ6A1A2 396 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TMC5Q6UXY8 1006 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NEK10Q6ZWH5 1172 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CYP4V2Q6ZWL3 525 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 AKAP14Q86UN6 197 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PALM2Q8IXS6 379 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MYO1HQ8N1T3 1032 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CLIP4Q8N3C7 705 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 LSMEM1Q8N8F7 131 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 FAM47BQ8NA70 645 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 FBXO36Q8NEA4 188 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 BHLHE22Q8NFJ8 381 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PIWIL2Q8TC59 973 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 OSCP1Q8WVF1 389 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GJA10Q969M2 543 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 VTI1AQ96AJ9 217 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TMA16Q96EY4 203 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 RTKNQ9BST9 563 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NAA50Q9GZZ1 169 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MRGBPQ9NV56 204 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 THAP1Q9NVV9 213 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GDAP2Q9NXN4 497 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ANAPC7Q9UJX3 599 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PACSIN3Q9UKS6 424 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 PLLPQ9Y342 182 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ST14Q9Y5Y6 855 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CAMTA1Q9Y6Y1 1673 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GOLGA8QA0A0J9YX86 632 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 FAM172BPA6NC97 362 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GOLGA8OA6NCC3 632 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 SYCE1LA8MT33 242 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 FAM155AB1AL88 458 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 CLDN25C9JDP6 229 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 GOLGA8NF8WBI6 632 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 NOP56O00567 594 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 LIASO43766 372 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 IDH3BO43837 385 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 MARCH6O60337 910 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 TMCC2O75069 709 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 RNASEH2AO75792 299 aaKnown RBP6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ZMPSTE24O75844 475 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 ALX3O95076 343 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 KRT6AP02538 564 aa6.55□□□□□ -1.36
CCNT1-202ENST00000417344 KRT6BP04259 564 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms