RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RRM1P23921 792 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ITGA1P56199 1179 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 WDR4P57081 412 aaKnown RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 PDZK1Q5T2W1 519 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 N4BP2L1Q5TBK1 243 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 CYP4A22Q5TCH4 519 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 DENND5BQ6ZUT9 1274 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 DPH6Q7L8W6 267 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 LSM14AQ8ND56 463 aaKnown RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 MBOAT7Q96N66 472 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 NUAK2Q9H093 628 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 COG4Q9H9E3 785 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 CHADO15335 359 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 BBOX1O75936 387 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 VAPBO95292 243 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 BPGMP07738 259 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ALAS1P13196 640 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 TFE3P19532 575 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 TROAPQ12815 778 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 MMRN1Q13201 1228 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 INSCQ1MX18 579 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 CERKLQ49MI3 558 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 TRIQKQ629K1 86 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 NOP9Q86U38 636 aaKnown RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 STX12Q86Y82 276 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ELMOD2Q8IZ81 293 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 MCFD2Q8NI22 146 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 CITED4Q96RK1 184 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 TBC1D14Q9P2M4 693 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 SALL4Q9UJQ4 1053 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 NDUFAF1Q9Y375 327 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 C10orf71Q711Q0 1435 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 TEX51A0A1B0GUA7 166 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 KCNN4O15554 427 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 VPS4BO75351 444 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ATXN3P54252 364 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 SEC23AQ15436 765 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ZNF181Q2M3W8 571 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 SLFN13Q68D06 897 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 TREML1Q86YW5 311 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 ZFP28Q8NHY6 868 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 SEMA6AQ9H2E6 1030 aa10.2□□□□□ -0.78
PTPRM-203ENST00000400060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.2□□□□□ -0.78
PTPRM-203ENST00000400060 FOXN3O00409 490 aaPredicted RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 MRASO14807 208 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 UBDO15205 165 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 GABBR2O75899 941 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 SEMA3DO95025 777 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 UMPSP11172 480 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CRHR1P34998 444 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 RXRGP48443 463 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 RPL10AP62906 217 aaKnown RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 PPATQ06203 517 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 XKR9Q5GH70 373 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 FRMD7Q6ZUT3 714 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 HACE1Q8IYU2 909 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 EID3Q8N140 333 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 LNX1Q8TBB1 728 aaPredicted RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 KCTD14Q9BQ13 255 aaPredicted RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 TRMT6Q9UJA5 497 aaKnown RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ERGIC3Q9Y282 383 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 PLLPQ9Y342 182 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 A0A0G2JLW4 131 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 UGT2B4P06133 528 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 PIK3R1P27986 724 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 NME3Q13232 169 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 KCTD8Q6ZWB6 473 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 LRRC8DQ7L1W4 858 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 TBC1D21Q8IYX1 336 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 BANPQ8N9N5 519 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ZNF518BQ9C0D4 1074 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 RUBCNLQ9H714 662 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 QPCTLQ9NXS2 382 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ZBTB39O15060 712 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CD3EAPO15446 510 aaKnown RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 DYRK3O43781 588 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 FAM20BO75063 409 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ECHS1P30084 290 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 RPL14P50914 215 aaKnown RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 COG2Q14746 738 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 IL23RQ5VWK5 629 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 BICRALQ6AI39 1079 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ZCCHC8Q6NZY4 707 aaKnown RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ANKRD13BQ86YJ7 626 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CHPT1Q8WUD6 406 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 SLC5A5Q92911 643 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 GINS4Q9BRT9 223 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CHST7Q9NS84 486 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CACNA2D2Q9NY47 1150 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 SUGT1Q9Y2Z0 365 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 GRIP1Q9Y3R0 1128 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CYP2D7A0A087X1C5 515 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 FAM170AA1A519 330 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 ZBTB5O15062 677 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 TSPAN1O60635 241 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 TDP2O95551 362 aa10.19□□□□□ -0.78
PTPRM-203ENST00000400060 CYP19A1P11511 503 aaPredicted RBP10.19□□□□□ -0.78
PTPRM-203ENST00000400060 TGM2P21980 687 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms