RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PTGES3LE9PB15 166 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 KRT33AO76009 404 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 SLC1A6P48664 564 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 ITGA9Q13797 1035 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 AGBL2Q5U5Z8 902 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 SCIMPQ6UWF3 145 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 GPR141Q7Z602 305 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 RNFT2Q96EX2 444 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 EXOC2Q96KP1 924 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 SH3GL2Q99962 352 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 AVENQ9NQS1 362 aaPredicted RBP14.06□□□□□ -0.16
VAPA-202ENST00000400000 CHKBQ9Y259 395 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 INPP4BO15327 924 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 HS6ST1O60243 411 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 YBX3P16989 372 aaKnown RBP eCLIP14.06□□□□□ -0.162e-8■■■□□ 15.6
VAPA-202ENST00000400000 CYP2A7P20853 494 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 POMZP3Q6PJE2 187 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 NEK10Q6ZWH5 1172 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 ZNF571Q7Z3V5 609 aaPredicted RBP14.06□□□□□ -0.16
VAPA-202ENST00000400000 CDC42EP4Q9H3Q1 356 aaKnown RBP14.06□□□□□ -0.16
VAPA-202ENST00000400000 COQ6Q9Y2Z9 468 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 FAM205AQ6ZU69 1335 aa14.06□□□□□ -0.16
VAPA-202ENST00000400000 TRBV23OR9-2A0A075B6M9 112 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 HNRNPRO43390 633 aaKnown RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 N4BP2L1Q5TBK1 243 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 RAP1GAP2Q684P5 730 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 BNC2Q6ZN30 1099 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 LRRC6Q86X45 466 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 ELL3Q9HB65 397 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 SEMA4BQ9NPR2 832 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 CCDC167Q9P0B6 97 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 TRIM13O60858 407 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 NTRK1P04629 796 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 CPA3P15088 417 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 OASLQ15646 514 aaKnown RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 TMEM237Q96Q45 408 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 GAD1Q99259 594 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 LIMD1Q9UGP4 676 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 MTA2O94776 668 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 GJB1P08034 283 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 RASA2Q15283 850 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 TBCELQ5QJ74 424 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 PLPP4Q5VZY2 271 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 ZNF57Q68EA5 555 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 KCNMB4Q86W47 210 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 SCUBE1Q8IWY4 988 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 COLGALT2Q8IYK4 626 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 PRCCQ92733 491 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 VPS9D1Q9Y2B5 631 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 AKAP3O75969 853 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 PSMC3P17980 439 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 MAPK7Q13164 816 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 SLC41A1Q8IVJ1 513 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 SYTL5Q8TDW5 730 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 TMEM79Q9BSE2 394 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 NUP62P37198 522 aaPredicted RBP14.05□□□□□ -0.16
VAPA-202ENST00000400000 PSEN2P49810 448 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 DEFB107AQ8IZN7 70 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 OR6K2Q8NGY2 324 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 SLC5A5Q92911 643 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 PHACTR1Q9C0D0 580 aa14.05□□□□□ -0.16
VAPA-202ENST00000400000 CCDC154A6NI56 674 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 PDE5AO76074 875 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 ATG7O95352 703 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 CTPS1P17812 591 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 EPORP19235 508 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 ANXA11P50995 505 aaKnown RBP14.04□□□□□ -0.16
VAPA-202ENST00000400000 BCL2L1Q07817 233 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 NEDD8Q15843 81 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 PCNX4Q63HM2 1172 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 PLEKHA7Q6IQ23 1121 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 LEMD2Q8NC56 503 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 C19orf18Q8NEA5 215 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 LRRC14BA6NHZ5 514 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 ABL2P42684 1182 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 STX5Q13190 355 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 TMEM26Q6ZUK4 368 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 DSEQ9UL01 958 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
VAPA-202ENST00000400000 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 TK2O00142 265 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 WNT10BO00744 389 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 KIF1CO43896 1103 aaKnown RBP14.04□□□□□ -0.16
VAPA-202ENST00000400000 SSTR1P30872 391 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 WASP42768 502 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 RBBP4Q09028 425 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 EIF2B5Q13144 721 aaKnown RBP14.04□□□□□ -0.16
VAPA-202ENST00000400000 VGLL4Q14135 290 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 DEFB106AQ8N104 65 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 EFCAB3Q8N7B9 438 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 KLHL3Q9UH77 587 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 RBAK-RBAKDNI3L0D1 243 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 FFAR3O14843 346 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 GPR42O15529 346 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 CNPP09543 421 aaKnown RBP14.04□□□□□ -0.16
VAPA-202ENST00000400000 ZSCAN5DPP0CG00 497 aa14.04□□□□□ -0.16
VAPA-202ENST00000400000 MAPK1P28482 360 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms