RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NRDE2Q9H7Z3 1164 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SLC5A4Q9NY91 659 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CACNG4Q9UBN1 327 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TSR3Q9UJK0 312 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ADAMTS5Q9UNA0 930 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CCL15-CCL14A0A0B4J2E2 113 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 GAS2O43903 313 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ANPEPP15144 967 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ACADSBP45954 432 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CCL15Q16663 113 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SV2CQ496J9 727 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CERCAMQ5T4B2 595 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TTC39CQ8N584 583 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CSPG4P5Q96PW8 444 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 USP29Q9HBJ7 922 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PTPRHQ9HD43 1115 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RPS6KL1Q9Y6S9 549 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 COL18A1P39060 1754 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 COL14A1Q05707 1796 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 C3orf70A6NLC5 250 aaPredicted RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SERPINE1P05121 402 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 FGFR1P11362 822 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 NEK3P51956 506 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 COG7P83436 770 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 NCBP2-AS2Q69YL0 99 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 FASTKD5Q7L8L6 764 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 STRA8Q7Z7C7 330 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 OSTM1Q86WC4 334 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 GSTCDQ8NEC7 633 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RHOBTB2Q9BYZ6 727 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RNF39Q9H2S5 420 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PPME1Q9Y570 386 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TJP1Q07157 1748 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PKD1L3Q7Z443 1732 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ARHGEF37A1IGU5 675 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 KLHL2O95198 593 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CCNB1P14635 433 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RAG1P15918 1043 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ETFBP38117 255 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 BEX3Q00994 111 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 BTKQ06187 659 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 MMEL1Q495T6 779 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 IRGCQ6NXR0 463 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 TREML1Q86YW5 311 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PPP1R14BQ96C90 147 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 FGD4Q96M96 766 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 BCO2Q9BYV7 579 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ZCWPW1Q9H0M4 648 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 PFDN4Q9NQP4 134 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 NOD1Q9Y239 953 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 POLBP06746 335 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 GNAT1P11488 350 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 ART3Q13508 389 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 KCNJ11Q14654 390 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 NOL9Q5SY16 702 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 BTBD8Q5XKL5 378 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 WSCD1Q658N2 575 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 OTOP3Q7RTS5 596 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 SNX32Q86XE0 403 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 RELL1Q8IUW5 271 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 GALNT4Q8N4A0 578 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 UPF1Q92900 1129 aaKnown RBP eCLIP5.06□□□□□ -1.61e-6■■■□□ 15.7
SMAD4-202ENST00000398417 P2RY11Q96G91 374 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 OMDQ99983 421 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 NXF3Q9H4D5 531 aaKnown RBP5.06□□□□□ -1.6
SMAD4-202ENST00000398417 EBF2Q9HAK2 575 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CYP4F12Q9HCS2 524 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 DDIT4Q9NX09 232 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 CNTN6Q9UQ52 1028 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 DTNAQ9Y4J8 743 aa5.06□□□□□ -1.6
SMAD4-202ENST00000398417 BRCC3P46736 316 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SLC10A2Q12908 348 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ACAP1Q15027 740 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 FBXO47Q5MNV8 452 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 DPY19L2Q6NUT2 758 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 C4orf22Q6V702 233 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MIPOL1Q8TD10 442 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 GDPD5Q8WTR4 605 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 HDAC11Q96DB2 347 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 LRRC40Q9H9A6 602 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 KRT82Q9NSB4 513 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NMRK1Q9NWW6 199 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 KCNK4Q9NYG8 393 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MID2Q9UJV3 735 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 A0A096LPK6 155 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 DAB1O75553 588 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 S100BP04271 92 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 NCAM1P13591 858 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 GP5P40197 560 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 GABRB2P47870 512 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PDE1CQ14123 709 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ARL13BQ3SXY8 428 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ITPRIPL1Q6GPH6 555 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ANO7Q6IWH7 933 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 TRNP1Q6NT89 227 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 ACAD11Q709F0 780 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 PLEKHH3Q7Z736 793 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 SLC41A1Q8IVJ1 513 aa5.05□□□□□ -1.6
SMAD4-202ENST00000398417 MIPEPQ99797 713 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms