RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 NRG2O14511 850 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 ZNF197O14709 1029 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 EIF3HO15372 352 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 ECEL1O95672 775 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FTCDO95954 541 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 CAPNS1P04632 268 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 CYP11A1P05108 521 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 VIMP08670 466 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 MYL4P12829 197 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 GJA1P17302 382 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 DESP17661 470 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 POLR2BP30876 1174 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 CCR2P41597 374 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 AP3M2P53677 418 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 GALCP54803 685 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 NRLP54845 237 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 CLDN10P78369 228 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 GCNT1Q02742 428 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 ARID5AQ03989 594 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 IFT88Q13099 833 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 DUSP4Q13115 394 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 GAS6Q14393 721 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SNRNP35Q16560 246 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SV2CQ496J9 727 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 CYP4A22Q5TCH4 519 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 WSCD1Q658N2 575 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 HEATR6Q6AI08 1181 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SCARA3Q6AZY7 606 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FOXR1Q6PIV2 292 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 MTSS1LQ765P7 747 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 PDZD4Q76G19 769 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 MAATS1Q7Z4T9 603 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 NT5DC3Q86UY8 548 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 METTL23Q86XA0 190 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 NT5DC4Q86YG4 428 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FAM71AQ8IYT1 594 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 THEM5Q8N1Q8 247 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 GPD1LQ8N335 351 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 ATAD1Q8NBU5 361 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FBXL13Q8NEE6 735 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 OR10T2Q8NGX3 314 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 CFAP61Q8NHU2 1237 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 ADAM32Q8TC27 787 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 EPS8L1Q8TE68 723 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SEC14L1Q92503 715 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SHC3Q92529 594 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FAM84AQ96KN4 292 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 RUFY1Q96T51 708 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 AGPAT1Q99943 283 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SH3GL2Q99962 352 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 LRRC1Q9BTT6 524 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 PACSIN1Q9BY11 444 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 TRIM4Q9C037 500 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 ARRDC1-AS1Q9H2J1 176 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 MMADHCQ9H3L0 296 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FAM204AQ9H8W3 233 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 HEBP1Q9NRV9 189 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 RBM12Q9NTZ6 932 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 QPCTLQ9NXS2 382 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 UVRAGQ9P2Y5 699 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 DSEQ9UL01 958 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 NDRG2Q9UN36 371 aaKnown RBP6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 YIPF1Q9Y548 306 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 F5P12259 2224 aa6.72□□□□□ -1.33
SMARCE1P6-201ENST00000398372 FREM2Q5SZK8 3169 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 EME2A4GXA9 379 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 A6NHS1 94 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 ZNF233A6NK53 670 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 KPNA7A9QM74 516 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 KCNK3O14649 394 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 HSF2BPO75031 334 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 RNF40O75150 1001 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 MOSPD3O75425 235 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 SOAT2O75908 522 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 RNF8O76064 485 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 HEXIM1O94992 359 aaKnown RBP6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 ITGB3P05106 788 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 KRT19P08727 400 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 ZNF806P0C7X5 589 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 TRIM49P0CI25 452 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 TRIM49CP0CI26 452 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 CCDC166P0CW27 439 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 MYBL1P10243 752 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 HSPA9P38646 679 aaKnown RBP6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 ALDH1A3P47895 512 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 NOVA1P51513 510 aaKnown RBP6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 IRAK1P51617 712 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 CCNG1P51959 295 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 EPHB3P54753 998 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 BPIFB4P59827 614 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 SKOR1P84550 965 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 CYP24A1Q07973 514 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 PPP3CAQ08209 521 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 ZNF252P-AS1Q0IIN9 211 aa6.71□□□□□ -1.34
SMARCE1P6-201ENST00000398372 PLD1Q13393 1074 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms