RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 TCF25Q9BQ70 676 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 IDI2Q9BXS1 227 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 C11orf49Q9H6J7 331 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 NR5A2O00482 541 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 GNSP15586 552 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 CXCR2P25025 360 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 NUP62P37198 522 aaPredicted RBP9.44□□□□□ -0.9
FREM1-201ENST00000380875 ACAP2Q15057 778 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 SDHAF4Q5VUM1 108 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 MOSPD2Q8NHP6 518 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
FREM1-201ENST00000380875 PTPRHQ9HD43 1115 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 CLDND1Q9NY35 253 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 CHKAP35790 457 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 ATP6AP1LQ52LC2 224 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 KLHL24Q6TFL4 600 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 METTL16Q86W50 562 aaKnown RBP9.44□□□□□ -0.9
FREM1-201ENST00000380875 FAM9CQ8IZT9 166 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 GALNT4Q8N4A0 578 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 CMTM5Q96DZ9 223 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 CCDC126Q96EE4 140 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 DPY30Q9C005 99 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 THAP2Q9H0W7 228 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 PIF1Q9H611 641 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 POLR1BQ9H9Y6 1135 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 IQGAP3Q86VI3 1631 aa9.44□□□□□ -0.9
FREM1-201ENST00000380875 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TMEM253P0C7T8 217 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 SELPP16109 830 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 MMP13P45452 471 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GLUD2P49448 558 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 EXOSC10Q01780 885 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 NFYCQ13952 458 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TARBP2Q15633 366 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 CNGA3Q16281 694 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 WSCD1Q658N2 575 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 PRPF39Q86UA1 669 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 CNDP1Q96KN2 507 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 RANBP17Q9H2T7 1088 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 SHOC2Q9UQ13 582 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GUCY1B2O75343 617 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 PCCBP05166 539 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 CLUP10909 449 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 HPCAL1P37235 193 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 CEP78Q5JTW2 689 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GPR135Q8IZ08 494 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 ST3GAL5Q9UNP4 418 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 USP20Q9Y2K6 914 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 PRKAB1Q9Y478 270 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 NCOA3Q9Y6Q9 1424 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 RHPN2P1A8MT19 583 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GTPBP1O00178 669 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 ALAS2P22557 587 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 HOXC12P31275 282 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GPR15P49685 360 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GRSF1Q12849 480 aaKnown RBP eCLIP9.43□□□□□ -0.9
FREM1-201ENST00000380875 CRY1Q16526 586 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 APBB2Q92870 758 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 EME1Q96AY2 570 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 RRN3Q9NYV6 651 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 ABI3Q9P2A4 366 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 SMAPO00193 183 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 SERPINB5P36952 375 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 LRRC36Q1X8D7 754 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 ATP13A4Q4VNC1 1196 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 PAGE2BQ5JRK9 111 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 CRTC3Q6UUV7 619 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 DENND6AQ8IWF6 608 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 MYCBPQ99417 103 aaPredicted RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 SYT17Q9BSW7 474 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 PRRG3Q9BZD7 231 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 DDX28Q9NUL7 540 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 DCDC2Q9UHG0 476 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 RAD54BQ9Y620 910 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 INPP4BO15327 924 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 KRT6AP02538 564 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 KRT6BP04259 564 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 INHAP05111 366 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 KRT6CP48668 564 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 FPGSQ05932 587 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 GRB10Q13322 594 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 NR6A1Q15406 480 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TFDP3Q5H9I0 405 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
FREM1-201ENST00000380875 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 SPATA20Q8TB22 786 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TRPC4APQ8TEL6 797 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 E2F7Q96AV8 911 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TPD52L3Q96J77 140 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 BPIFA1Q9NP55 256 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 CLIC5Q9NZA1 410 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 SLC27A6Q9Y2P4 619 aa9.43□□□□□ -0.9
FREM1-201ENST00000380875 TMEM150BA6NC51 233 aa9.42□□□□□ -0.9
FREM1-201ENST00000380875 GMNCA6NCL1 334 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms