RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 CFAP52Q8N1V2 620 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 CPA6Q8N4T0 437 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 CSGALNACT1Q8TDX6 532 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 DNASE1L2Q92874 299 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 CHFRQ96EP1 664 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
SMN1-202ENST00000380707 DDX50Q9BQ39 737 aaKnown RBP13.09□□□□□ -0.31
SMN1-202ENST00000380707 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
SMN1-202ENST00000380707 HEBP1Q9NRV9 189 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 TRMT1Q9NXH9 659 aaKnown RBP13.09□□□□□ -0.31
SMN1-202ENST00000380707 VANGL2Q9ULK5 521 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 AP4E1Q9UPM8 1137 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 MYOFQ9NZM1 2061 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
SMN1-202ENST00000380707 NEDD8-MDP1E9PL57 170 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 F5H5T6 163 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 SRGAP2O75044 1071 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 PALMO75781 387 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 ADH1CP00326 375 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 ADH5P11766 374 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 TYRP14679 529 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 GJA4P35212 333 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 IRAK1P51617 712 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 RPS24P62847 133 aaKnown RBP13.08□□□□□ -0.31
SMN1-202ENST00000380707 PFKPQ01813 784 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.31
SMN1-202ENST00000380707 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.31
SMN1-202ENST00000380707 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 UBALD2Q8IYN6 164 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 DDI1Q8WTU0 396 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 HSPH1Q92598 858 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 IGSF8Q969P0 613 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 BBS2Q9BXC9 721 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 MARK1Q9P0L2 795 aa13.08□□□□□ -0.31
SMN1-202ENST00000380707 USP27XA6NNY8 438 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 E9PAM4 449 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 HOXC11O43248 304 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 SPOPO43791 374 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 TBL1XO60907 577 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 PENKP01210 267 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 COL4A2P08572 1712 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 TNNT1P13805 278 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 L1CAMP32004 1257 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 GJC1P36383 396 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 NRG1Q02297 640 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 GAD2Q05329 585 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 NR1H3Q13133 447 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 SEMA3BQ13214 749 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 MPPE1Q53F39 396 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 SLC44A4Q53GD3 710 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 ACBD5Q5T8D3 534 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 NAIF1Q69YI7 327 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 CIR1Q86X95 450 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 NAT16Q8N8M0 369 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 TEKT4Q8WW24 435 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 DHX35Q9H5Z1 703 aaKnown RBP13.08□□□□□ -0.32
SMN1-202ENST00000380707 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMN1-202ENST00000380707 CLEC4EQ9ULY5 219 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 PIAS3Q9Y6X2 628 aa13.08□□□□□ -0.32
SMN1-202ENST00000380707 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 IGLV3-10A0A075B6K4 115 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 SHISA7A6NL88 538 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 DRGXA6NNA5 263 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 CREB3O43889 395 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 CNTN5O94779 1100 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 LRIG2O94898 1065 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 CYBBP04839 570 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 KRT7P08729 469 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 SLC6A11P48066 632 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 PPP6R3Q5H9R7 873 aaPredicted RBP13.07□□□□□ -0.32
SMN1-202ENST00000380707 RABGAP1LQ5R372 815 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 MPP7Q5T2T1 576 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 RNF43Q68DV7 783 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 CCAR2Q8N163 923 aaKnown RBP13.07□□□□□ -0.32
SMN1-202ENST00000380707 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
SMN1-202ENST00000380707 CD101Q93033 1021 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 KLHL11Q9NVR0 708 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 STIM2Q9P246 746 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 CA14Q9ULX7 337 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
SMN1-202ENST00000380707 F5P12259 2224 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 TRIM24O15164 1050 aa13.06□□□□□ -0.32
SMN1-202ENST00000380707 CACNG3O60359 315 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms