RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ZNF354BQ96LW1 612 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 SLC4A9Q96Q91 983 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 OXCT2Q9BYC2 517 aaPredicted RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 POMKQ9H5K3 350 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 SAE1Q9UBE0 346 aaPredicted RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 PSMD9O00233 223 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 CDH16O75309 829 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 MTAPQ13126 283 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 MADCAM1Q13477 382 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 OASLQ15646 514 aaKnown RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 FAM45BPQ6NSW5 357 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 DENND1CQ8IV53 801 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 GPR156Q8NFN8 814 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 KLHL28Q9NXS3 571 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 ENTPD4Q9Y227 616 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 BCAT1P54687 386 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 TBCELQ5QJ74 424 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 TMEM176AQ96HP8 235 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 PCDH12Q9NPG4 1184 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 CLEC4AQ9UMR7 237 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 SYNMO15061 1565 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 AKT2P31751 481 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 WASP42768 502 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 GET4Q7L5D6 327 aaPredicted RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 AGPAT3Q9NRZ7 376 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 TMA7Q9Y2S6 64 aaKnown RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 GTPBP1O00178 669 aaKnown RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 RPL4P36578 427 aaKnown RBP16.67■□□□□ 0.26
RGP1-201ENST00000378078 PEX5P50542 639 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 BCL2L1Q07817 233 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 KLHDC7AQ5VTJ3 777 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 CES5AQ6NT32 575 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 CDC73Q6P1J9 531 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 SATB2Q9UPW6 733 aa16.67■□□□□ 0.26
RGP1-201ENST00000378078 KIAA0391O15091 583 aaKnown RBP16.66■□□□□ 0.26
RGP1-201ENST00000378078 INPP4BO15327 924 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 NTRK1P04629 796 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 SUPT20HL2P0C7V6 817 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 PON1P27169 355 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 C1DQ13901 141 aaKnown RBP16.66■□□□□ 0.26
RGP1-201ENST00000378078 SLC20A1Q8WUM9 679 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 COMMD8Q9NX08 183 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 CEBPGP53567 150 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 ABRQ12979 859 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 TSPAN19P0C672 248 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 OR56A5P0C7T3 313 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 AMPD1P23109 780 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 GPR15P49685 360 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 PMEPA1Q969W9 287 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 MIEF2Q96C03 454 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 MTG1Q9BT17 334 aaPredicted RBP16.66■□□□□ 0.26
RGP1-201ENST00000378078 ADAM30Q9UKF2 790 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 ABHD14A-ACY1A0A1B0GW23 586 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 ICAM1P05362 532 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 IL27RAQ6UWB1 636 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 SETD6Q8TBK2 473 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 CASKIN2Q8WXE0 1202 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 C19orf60Q96EN9 201 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 RBAK-RBAKDNI3L0D1 243 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 USP12O75317 370 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 LHX1P48742 406 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 OR10H1Q9Y4A9 318 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 NDST1P52848 882 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 SLITRK2Q9H156 845 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 MRPL17Q9NRX2 175 aaKnown RBP16.66■□□□□ 0.26
RGP1-201ENST00000378078 OSER1Q9NX31 292 aa16.66■□□□□ 0.26
RGP1-201ENST00000378078 HOXA2O43364 376 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 CCR1P32246 355 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 SLC1A6P48664 564 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 TBX2Q13207 712 aaPredicted RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 NETO2Q8NC67 525 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 GLRA3O75311 464 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 PABPC1P11940 636 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 ADORA2AP29274 412 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 BNC2Q6ZN30 1099 aaPredicted RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 SLC41A1Q8IVJ1 513 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 REXO5Q96IC2 774 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 MRPS7Q9Y2R9 242 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 ANKDD1BA6NHY2 528 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 DDX3XO00571 662 aaKnown RBP eCLIP16.65■□□□□ 0.261e-11■■■■□ 22.1
RGP1-201ENST00000378078 RAMP2O60895 175 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 SCN2BO60939 215 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 ALAS2P22557 587 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
RGP1-201ENST00000378078 ERMARDQ5T6L9 678 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 AGGF1Q8N302 714 aaeCLIP16.65■□□□□ 0.26
RGP1-201ENST00000378078 PDCD10Q9BUL8 212 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 DUSP10Q9Y6W6 482 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 TBL1XO60907 577 aa16.65■□□□□ 0.26
RGP1-201ENST00000378078 CTPS1P17812 591 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms